2emo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 23 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2emo.png|left|200px]]
 
-
{{STRUCTURE_2emo| PDB=2emo | SCENE= }}
+
==GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT==
-
 
+
<StructureSection load='2emo' size='340' side='right'caption='[[2emo]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
===GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2emo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EMO FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSH:[2-(2-HYDROXY-1-METHYL-ETHYL)-4-(1H-IMIDAZOL-4-YLMETHYL)-5-OXO-IMIDAZOLIDIN-1-YL]-ACETIC+ACID'>CSH</scene></td></tr>
-
[[2emo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EMO OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2emo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2emo OCA], [https://pdbe.org/2emo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2emo RCSB], [https://www.ebi.ac.uk/pdbsum/2emo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2emo ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/2emo_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2emo ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Alyssa Marsico/Sandbox 1|Alyssa Marsico/Sandbox 1]]
+
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
-
*[[Devon McCarthy/Sandbox 1|Devon McCarthy/Sandbox 1]]
+
__TOC__
-
*[[Green Fluorescent Protein|Green Fluorescent Protein]]
+
</StructureSection>
-
*[[Sandbox104|Sandbox104]]
+
-
*[[User:Joanne Lau/Sandbox 5|User:Joanne Lau/Sandbox 5]]
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:009145105</ref><references group="xtra"/>
+
[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
-
[[Category: Palm, G.]]
+
[[Category: Large Structures]]
-
[[Category: Wlodawer, A.]]
+
[[Category: Palm G]]
-
[[Category: Zdanov, A.]]
+
[[Category: Wlodawer A]]
-
[[Category: Beta-barrel]]
+
[[Category: Zdanov A]]
-
[[Category: Bioluminescence]]
+
-
[[Category: Fluorescent protein]]
+
-
[[Category: Luminescence]]
+

Current revision

GREEN FLUORESCENT PROTEIN FROM AEQUOREA VICTORIA, MUTANT

PDB ID 2emo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools