1q1m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:54, 16 August 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1q1m.png|left|200px]]
 
-
{{STRUCTURE_1q1m| PDB=1q1m | SCENE= }}
+
==A Highly Efficient Approach to a Selective and Cell Active PTP1B inhibitors==
 +
<StructureSection load='1q1m' size='340' side='right'caption='[[1q1m]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1q1m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q1M FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=234:5-{2-FLUORO-5-[3-(3-HYDROXY-2-METHOXYCARBONYL-PHENOXY)-PROPENYL]-PHENYL}-ISOXAZOLE-3-CARBOXYLIC+ACID'>234</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q1m OCA], [https://pdbe.org/1q1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q1m RCSB], [https://www.ebi.ac.uk/pdbsum/1q1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q1m ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PTN1_HUMAN PTN1_HUMAN] Tyrosine-protein phosphatase which acts as a regulator of endoplasmic reticulum unfolded protein response. Mediates dephosphorylation of EIF2AK3/PERK; inactivating the protein kinase activity of EIF2AK3/PERK. May play an important role in CKII- and p60c-src-induced signal transduction cascades. May regulate the EFNA5-EPHA3 signaling pathway which modulates cell reorganization and cell-cell repulsion.<ref>PMID:21135139</ref> <ref>PMID:22169477</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q1/1q1m_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q1m ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Using an NMR-based fragment screening and X-ray crystal structure-based assembly, starting with millimolar ligands for both the catalytic site and the second phosphotyrosine binding site, we have identified a small-molecule inhibitor of protein tyrosine phosphatase 1B with low micromolar inhibition constant, high selectivity (30-fold) over the highly homologous T-cell protein tyrosine phosphatase, and good cellular activity in COS-7 cells.
-
===A Highly Efficient Approach to a Selective and Cell Active PTP1B inhibitors===
+
Fragment screening and assembly: a highly efficient approach to a selective and cell active protein tyrosine phosphatase 1B inhibitor.,Liu G, Xin Z, Pei Z, Hajduk PJ, Abad-Zapatero C, Hutchins CW, Zhao H, Lubben TH, Ballaron SJ, Haasch DL, Kaszubska W, Rondinone CM, Trevillyan JM, Jirousek MR J Med Chem. 2003 Sep 25;46(20):4232-5. PMID:13678400<ref>PMID:13678400</ref>
-
{{ABSTRACT_PUBMED_13678400}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1q1m" style="background-color:#fffaf0;"></div>
-
[[1q1m]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q1M OCA].
+
==See Also==
==See Also==
-
*[[Tyrosine phosphatase|Tyrosine phosphatase]]
+
*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:013678400</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Protein-tyrosine-phosphatase]]
+
[[Category: Large Structures]]
-
[[Category: Abad-Zapatero, C.]]
+
[[Category: Abad-Zapatero C]]
-
[[Category: Ballaron, S J.]]
+
[[Category: Ballaron SJ]]
-
[[Category: Haasch, D L.]]
+
[[Category: Haasch DL]]
-
[[Category: Hajduk, P J.]]
+
[[Category: Hajduk PJ]]
-
[[Category: Hutchins, C W.]]
+
[[Category: Hutchins CW]]
-
[[Category: Jirousek, M R.]]
+
[[Category: Jirousek MR]]
-
[[Category: Kaszubska, W.]]
+
[[Category: Kaszubska W]]
-
[[Category: Liu, G.]]
+
[[Category: Liu G]]
-
[[Category: Lubben, T H.]]
+
[[Category: Lubben TH]]
-
[[Category: Pei, Z.]]
+
[[Category: Pei Z]]
-
[[Category: Rondinone, C M.]]
+
[[Category: Rondinone CM]]
-
[[Category: Trevillyan, J M.]]
+
[[Category: Trevillyan JM]]
-
[[Category: Xin, Z.]]
+
[[Category: Xin Z]]
-
[[Category: Zhao, H.]]
+
[[Category: Zhao H]]
-
[[Category: Hydrolase]]
+
-
[[Category: Inhibitors with isoxazole-salicylate pharmacophore]]
+
-
[[Category: Protein tyrosine phosphatase 1b]]
+
-
[[Category: Ptp1b]]
+

Current revision

A Highly Efficient Approach to a Selective and Cell Active PTP1B inhibitors

PDB ID 1q1m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1q1m"
Personal tools