3rrm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:44, 1 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3rrm.png|left|200px]]
 
-
{{STRUCTURE_3rrm| PDB=3rrm | SCENE= }}
+
==S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp==
-
 
+
<StructureSection load='3rrm' size='340' side='right'caption='[[3rrm]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
===S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3rrm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3pez 3pez]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RRM FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_21441902}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=IHP:INOSITOL+HEXAKISPHOSPHATE'>IHP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rrm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rrm OCA], [https://pdbe.org/3rrm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rrm RCSB], [https://www.ebi.ac.uk/pdbsum/3rrm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rrm ProSAT]</span></td></tr>
-
[[3rrm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3pez 3pez]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRM OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DBP5_YEAST DBP5_YEAST] ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. Contributes to the blocking of bulk poly(A)+ mRNA export in ethanol-stressed cells. May also be involved in early transcription.<ref>PMID:9564047</ref> <ref>PMID:9564048</ref> <ref>PMID:10428971</ref> <ref>PMID:10610322</ref> <ref>PMID:10523319</ref> <ref>PMID:11350039</ref> <ref>PMID:12192043</ref> <ref>PMID:12686617</ref> <ref>PMID:15280434</ref> <ref>PMID:15574330</ref> <ref>PMID:15619606</ref>
==See Also==
==See Also==
-
*[[Helicase|Helicase]]
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
*[[Nucleoporin|Nucleoporin]]
+
*[[Nucleoporin 3D structures|Nucleoporin 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:021441902</ref><references group="xtra"/>
+
__TOC__
-
[[Category: RNA helicase]]
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Berger, J M.]]
+
[[Category: Berger JM]]
-
[[Category: Helmke, K J.]]
+
[[Category: Helmke KJ]]
-
[[Category: Montpetit, B.]]
+
[[Category: Montpetit B]]
-
[[Category: Seeliger, M A.]]
+
[[Category: Seeliger MA]]
-
[[Category: Thomsen, N D.]]
+
[[Category: Thomsen ND]]
-
[[Category: Weis, K.]]
+
[[Category: Weis K]]
-
[[Category: Atpase]]
+
-
[[Category: Beta-propeller]]
+
-
[[Category: Dead-box]]
+
-
[[Category: Heat-repeat]]
+
-
[[Category: Helicase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mrna-export]]
+
-
[[Category: Nuclear pore]]
+
-
[[Category: Reca]]
+

Current revision

S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp

PDB ID 3rrm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3rrm"
Personal tools