This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2qu8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:17, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qu8.png|left|200px]]
 
-
{{STRUCTURE_2qu8| PDB=2qu8 | SCENE= }}
+
==Crystal structure of putative nucleolar GTP-binding protein 1 PFF0625w from Plasmodium falciparum==
-
 
+
<StructureSection load='2qu8' size='340' side='right'caption='[[2qu8]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-
===Crystal structure of putative nucleolar GTP-binding protein 1 PFF0625w from Plasmodium falciparum===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2qu8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QU8 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
-
[[2qu8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QU8 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qu8 OCA], [https://pdbe.org/2qu8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qu8 RCSB], [https://www.ebi.ac.uk/pdbsum/2qu8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qu8 ProSAT]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qu/2qu8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qu8 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cytochrome P450|Cytochrome P450]]
+
*[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]]
-
[[Category: Plasmodium falciparum]]
+
__TOC__
-
[[Category: Arrowsmith, C H.]]
+
</StructureSection>
-
[[Category: Bochkarev, A.]]
+
[[Category: Large Structures]]
-
[[Category: Edwards, A M.]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: Hassanali, A.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Hui, R.]]
+
[[Category: Bochkarev A]]
-
[[Category: Kozieradzki, I.]]
+
[[Category: Edwards AM]]
-
[[Category: Lew, J.]]
+
[[Category: Hassanali A]]
-
[[Category: Lin, Y H.]]
+
[[Category: Hui R]]
-
[[Category: Qiu, W.]]
+
[[Category: Kozieradzki I]]
-
[[Category: Ravichandran, M.]]
+
[[Category: Lew J]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Lin YH]]
-
[[Category: Shapiro, M.]]
+
[[Category: Qiu W]]
-
[[Category: Sukumar, D.]]
+
[[Category: Ravichandran M]]
-
[[Category: Sundstrom, M.]]
+
[[Category: Shapiro M]]
-
[[Category: Weigelt, J.]]
+
[[Category: Sukumar D]]
-
[[Category: Wernimont, A K.]]
+
[[Category: Sundstrom M]]
-
[[Category: Zhao, Y.]]
+
[[Category: Weigelt J]]
-
[[Category: Gtpase]]
+
[[Category: Wernimont AK]]
-
[[Category: Malaria]]
+
[[Category: Zhao Y]]
-
[[Category: Plasmodium falciparum]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of putative nucleolar GTP-binding protein 1 PFF0625w from Plasmodium falciparum

PDB ID 2qu8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qu8"
Personal tools