1cmv
From Proteopedia
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| - | [[Image:1cmv.png|left|200px]] | ||
| - | + | ==HUMAN CYTOMEGALOVIRUS PROTEASE== | |
| - | + | <StructureSection load='1cmv' size='340' side='right'caption='[[1cmv]], [[Resolution|resolution]] 2.27Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1cmv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_betaherpesvirus_5 Human betaherpesvirus 5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CMV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CMV FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cmv OCA], [https://pdbe.org/1cmv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cmv RCSB], [https://www.ebi.ac.uk/pdbsum/1cmv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cmv ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1cmv]] is a 2 chain structure with sequence from [ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/SCAF_HCMVA SCAF_HCMVA] Capsid scaffolding protein acts as a scaffold protein by binding major capsid protein UL86 in the cytoplasm, inducing the nuclear localization of both proteins. Multimerizes in the nucleus such as protein UL86 forms the icosahedral T=16 capsid. Autocatalytic cleavage releases the assembly protein, and subsequently abolishes interaction with major capsid protein UL86. Cleavages products are evicted from the capsid before or during DNA packaging (By similarity). Assemblin is a protease essential for virion assembly in the nucleus. Catalyzes the cleavage of the assembly protein after complete capsid formation. Assemblin and cleavages products are evicted from the capsid before or during DNA packaging (By similarity). Assembly protein plays a major role in capsid assembly. Acts as a scaffold protein by binding major capsid protein UL86. Multimerizes in the nucleus such as protein UL86 forms the icosahedral T=16 capsid. Cleaved by assemblin after capsid completion. The cleavages products are evicted from the capsid before or during DNA packaging (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cm/1cmv_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cmv ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Virus protease|Virus protease]] | + | *[[Virus protease 3D structures|Virus protease 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Human betaherpesvirus 5]] | |
| - | [[Category: Human | + | [[Category: Large Structures]] |
| - | [[Category: Holwerda | + | [[Category: Holwerda BC]] |
| - | [[Category: Kurumbail | + | [[Category: Kurumbail RG]] |
| - | [[Category: Pak | + | [[Category: Pak JY]] |
| - | [[Category: Palmier | + | [[Category: Palmier MO]] |
| - | [[Category: Shieh | + | [[Category: Shieh H-S]] |
| - | [[Category: Stallings | + | [[Category: Stallings WC]] |
| - | [[Category: Stegeman | + | [[Category: Stegeman RA]] |
| - | [[Category: Stevens | + | [[Category: Stevens AM]] |
| - | [[Category: Sturman | + | [[Category: Sturman EJ]] |
| - | [[Category: Wiegand | + | [[Category: Wiegand RC]] |
| - | [[Category: Wittwer | + | [[Category: Wittwer AJ]] |
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Current revision
HUMAN CYTOMEGALOVIRUS PROTEASE
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