This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1sek
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1sek.png|left|200px]] | ||
| - | + | ==THE STRUCTURE OF ACTIVE SERPIN K FROM MANDUCA SEXTA AND A MODEL FOR SERPIN-PROTEASE COMPLEX FORMATION== | |
| - | + | <StructureSection load='1sek' size='340' side='right'caption='[[1sek]], [[Resolution|resolution]] 2.10Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1sek]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Manduca_sexta Manduca sexta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SEK FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sek OCA], [https://pdbe.org/1sek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sek RCSB], [https://www.ebi.ac.uk/pdbsum/1sek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sek ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1sek]] is a 1 chain structure with sequence from [ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q25526_MANSE Q25526_MANSE] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/se/1sek_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sek ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Serpin|Serpin]] | + | *[[Serpin 3D structures|Serpin 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | < | + | [[Category: Large Structures]] |
[[Category: Manduca sexta]] | [[Category: Manduca sexta]] | ||
| - | [[Category: Canagarajah | + | [[Category: Canagarajah B]] |
| - | [[Category: Goldsmith | + | [[Category: Goldsmith EJ]] |
| - | [[Category: Jiang | + | [[Category: Jiang H]] |
| - | [[Category: Kanost | + | [[Category: Kanost M]] |
| - | [[Category: Li | + | [[Category: Li J]] |
| - | [[Category: Wang | + | [[Category: Wang Z]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
THE STRUCTURE OF ACTIVE SERPIN K FROM MANDUCA SEXTA AND A MODEL FOR SERPIN-PROTEASE COMPLEX FORMATION
| |||||||||||
Categories: Large Structures | Manduca sexta | Canagarajah B | Goldsmith EJ | Jiang H | Kanost M | Li J | Wang Z
