This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vd5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:24, 14 March 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3vd5.png|left|200px]]
 
-
{{STRUCTURE_3vd5| PDB=3vd5 | SCENE= }}
+
==E. coli (lacZ) beta-galactosidase (N460S)==
-
 
+
<StructureSection load='3vd5' size='340' side='right'caption='[[3vd5]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
===E. coli (lacZ) beta-galactosidase (N460S)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3vd5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VD5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VD5 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_22446164}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vd5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vd5 OCA], [https://pdbe.org/3vd5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vd5 RCSB], [https://www.ebi.ac.uk/pdbsum/3vd5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vd5 ProSAT]</span></td></tr>
-
[[3vd5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VD5 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BGAL_ECOLI BGAL_ECOLI]
==See Also==
==See Also==
-
*[[Galactosidase|Galactosidase]]
+
*[[Galactosidase 3D structures|Galactosidase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:022446164</ref><references group="xtra"/>
+
-
[[Category: Beta-galactosidase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Dugdale, M L.]]
+
[[Category: Large Structures]]
-
[[Category: Dutkoski, M J.]]
+
[[Category: Dugdale ML]]
-
[[Category: Fraser, M E.]]
+
[[Category: Dutkoski MJ]]
-
[[Category: Hahn, J N.]]
+
[[Category: Fraser ME]]
-
[[Category: Huber, R E.]]
+
[[Category: Hahn JN]]
-
[[Category: Kappelhoff, J C.]]
+
[[Category: Huber RE]]
-
[[Category: Tamman, S D.]]
+
[[Category: Kappelhoff JC]]
-
[[Category: Wheatley, R W.]]
+
[[Category: Tamman SD]]
-
[[Category: 2-stage binding]]
+
[[Category: Wheatley RW]]
-
[[Category: Beta supersandwich]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Immunoglobulin]]
+
-
[[Category: Jelly-roll barrel]]
+
-
[[Category: Substrate binding]]
+
-
[[Category: Transition state stabilization]]
+

Current revision

E. coli (lacZ) beta-galactosidase (N460S)

PDB ID 3vd5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools