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1p3q
From Proteopedia
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| - | [[Image:1p3q.png|left|200px]] | ||
| - | + | ==Mechanism of Ubiquitin Recognition by the CUE Domain of VPS9== | |
| - | + | <StructureSection load='1p3q' size='340' side='right'caption='[[1p3q]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1p3q]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P3Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P3Q FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p3q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p3q OCA], [https://pdbe.org/1p3q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p3q RCSB], [https://www.ebi.ac.uk/pdbsum/1p3q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p3q ProSAT]</span></td></tr> |
| - | [[1p3q]] is a 4 chain structure with sequence from [ | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/VPS9_YEAST VPS9_YEAST] Required for vacuolar protein sorting; may be required for the consumption of transport vesicles containing vacuolar protein precursors. May bind a Rab GTPase such as VPS21. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p3/1p3q_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p3q ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[ | + | *[[Vacuolar protein sorting-associated protein 3D structures|Vacuolar protein sorting-associated protein 3D structures]] |
| - | + | *[[3D structures of ubiquitin|3D structures of ubiquitin]] | |
| - | + | __TOC__ | |
| - | < | + | </StructureSection> |
[[Category: Bos taurus]] | [[Category: Bos taurus]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Saccharomyces cerevisiae]] | [[Category: Saccharomyces cerevisiae]] | ||
| - | [[Category: Davies | + | [[Category: Davies BA]] |
| - | [[Category: Ghirlando | + | [[Category: Ghirlando R]] |
| - | [[Category: Horazdovsky | + | [[Category: Horazdovsky BF]] |
| - | [[Category: Hurley | + | [[Category: Hurley JH]] |
| - | [[Category: Jones | + | [[Category: Jones EA]] |
| - | [[Category: Misra | + | [[Category: Misra S]] |
| - | [[Category: Prag | + | [[Category: Prag G]] |
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Current revision
Mechanism of Ubiquitin Recognition by the CUE Domain of VPS9
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