1nij

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:57, 14 February 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nij.jpg|left|200px]]<br /><applet load="1nij" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1nij, resolution 2.00&Aring;" />
 
-
'''YJIA PROTEIN'''<br />
 
-
==About this Structure==
+
==YJIA PROTEIN==
-
1NIJ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA].
+
<StructureSection load='1nij' size='340' side='right'caption='[[1nij]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1nij]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NIJ FirstGlance]. <br>
-
Crystal structure of the Escherichia coli YjiA protein suggests a GTP-dependent regulatory function., Khil PP, Obmolova G, Teplyakov A, Howard AJ, Gilliland GL, Camerini-Otero RD, Proteins. 2004 Feb 1;54(2):371-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=14696199 14696199]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nij OCA], [https://pdbe.org/1nij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nij RCSB], [https://www.ebi.ac.uk/pdbsum/1nij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nij ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/YJIA_ECOLI YJIA_ECOLI] Binds GTP. May function as GTP-dependent regulator.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/1nij_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nij ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Camerini-Otero, R D.]]
+
[[Category: Camerini-Otero RD]]
-
[[Category: Gilliland, G L.]]
+
[[Category: Gilliland GL]]
-
[[Category: Howard, A J.]]
+
[[Category: Howard AJ]]
-
[[Category: Khil, P P.]]
+
[[Category: Khil PP]]
-
[[Category: Obmolova, G.]]
+
[[Category: Obmolova G]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Teplyakov A]]
-
[[Category: Teplyakov, A.]]
+
-
[[Category: gtp binding]]
+
-
[[Category: p-loop protein]]
+
-
[[Category: s2f]]
+
-
[[Category: structural genomics]]
+
-
[[Category: structure 2 function project]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:06:29 2008''
+

Current revision

YJIA PROTEIN

PDB ID 1nij

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools