3bbx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:28, 21 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3bbx.png|left|200px]]
 
-
{{STRUCTURE_3bbx| PDB=3bbx | SCENE= }}
+
==The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex==
-
 
+
<SX load='3bbx' size='340' side='right' viewer='molstar' caption='[[3bbx]], [[Resolution|resolution]] 10.00&Aring;' scene=''>
-
===The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3bbx]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BBX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BBX FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19013177}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 10&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bbx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bbx OCA], [https://pdbe.org/3bbx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bbx RCSB], [https://www.ebi.ac.uk/pdbsum/3bbx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bbx ProSAT]</span></td></tr>
-
[[3bbx]] is a 29 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BBX OCA].
+
</table>
-
 
+
== Function ==
-
==See Also==
+
[https://www.uniprot.org/uniprot/RL25_ECOLI RL25_ECOLI] This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Binds to the 5S rRNA independently of L5 and L18. Not required for binding of the 5S rRNA/L5/L18 subcomplex to 23S rRNA.[HAMAP-Rule:MF_01336]
-
*[[Ribosomal protein L13|Ribosomal protein L13]]
+
== Evolutionary Conservation ==
-
*[[Ribosomal protein L14|Ribosomal protein L14]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
*[[Ribosomal protein L15|Ribosomal protein L15]]
+
Check<jmol>
-
*[[Ribosomal protein L16|Ribosomal protein L16]]
+
<jmolCheckbox>
-
*[[Ribosomal protein L17|Ribosomal protein L17]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bb/3bbx_consurf.spt"</scriptWhenChecked>
-
*[[Ribosomal protein L18|Ribosomal protein L18]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
*[[Ribosomal protein L19|Ribosomal protein L19]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
*[[Ribosomal protein L2|Ribosomal protein L2]]
+
</jmolCheckbox>
-
*[[Ribosomal protein L20|Ribosomal protein L20]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bbx ConSurf].
-
*[[Ribosomal protein L21|Ribosomal protein L21]]
+
<div style="clear:both"></div>
-
*[[Ribosomal protein L22|Ribosomal protein L22]]
+
__TOC__
-
*[[Ribosomal protein L23|Ribosomal protein L23]]
+
</SX>
-
*[[Ribosomal protein L24|Ribosomal protein L24]]
+
-
*[[Ribosomal protein L25|Ribosomal protein L25]]
+
-
*[[Ribosomal protein L27|Ribosomal protein L27]]
+
-
*[[Ribosomal protein L29|Ribosomal protein L29]]
+
-
*[[Ribosomal protein L3|Ribosomal protein L3]]
+
-
*[[Ribosomal protein L30|Ribosomal protein L30]]
+
-
*[[Ribosomal protein L31|Ribosomal protein L31]]
+
-
*[[Ribosomal protein L32|Ribosomal protein L32]]
+
-
*[[Ribosomal protein L33|Ribosomal protein L33]]
+
-
*[[Ribosomal protein L34|Ribosomal protein L34]]
+
-
*[[Ribosomal protein L35|Ribosomal protein L35]]
+
-
*[[Ribosomal protein L36|Ribosomal protein L36]]
+
-
*[[Ribosomal protein L4|Ribosomal protein L4]]
+
-
*[[Ribosomal protein L5|Ribosomal protein L5]]
+
-
*[[Ribosomal protein L6|Ribosomal protein L6]]
+
-
*[[Ribosomal protein L9|Ribosomal protein L9]]
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:019013177</ref><references group="xtra"/>
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Abrahams, J P.]]
+
[[Category: Large Structures]]
-
[[Category: Jiang, L.]]
+
[[Category: Abrahams JP]]
-
[[Category: 50s rescue stalled ribosome]]
+
[[Category: Jiang L]]
-
[[Category: Large subunit]]
+
-
[[Category: Ribosomal complex]]
+
-
[[Category: Ribosome]]
+

Current revision

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

3bbx, resolution 10.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3bbx"
Personal tools