1nnq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 14 February 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nnq.gif|left|200px]]<br /><applet load="1nnq" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1nnq, resolution 2.35&Aring;" />
 
-
'''rubrerythrin from Pyrococcus furiosus Pfu-1210814'''<br />
 
-
==About this Structure==
+
==rubrerythrin from Pyrococcus furiosus Pfu-1210814==
-
1NNQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNQ OCA].
+
<StructureSection load='1nnq' size='340' side='right'caption='[[1nnq]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Reference==
+
<table><tr><td colspan='2'>[[1nnq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NNQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NNQ FirstGlance]. <br>
-
Structural genomics of Pyrococcus furiosus: X-ray crystallography reveals 3D domain swapping in rubrerythrin., Tempel W, Liu ZJ, Schubot FD, Shah A, Weinberg MV, Jenney FE Jr, Arendall WB 3rd, Adams MW, Richardson JS, Richardson DC, Rose JP, Wang BC, Proteins. 2004 Dec 1;57(4):878-82. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15468318 15468318]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nnq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nnq OCA], [https://pdbe.org/1nnq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nnq RCSB], [https://www.ebi.ac.uk/pdbsum/1nnq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nnq ProSAT], [https://www.topsan.org/Proteins/SECSG/1nnq TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9UWP7_9EURY Q9UWP7_9EURY]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nn/1nnq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nnq ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Single protein]]
+
[[Category: Arendall III WB]]
-
[[Category: III, W B.Arendall.]]
+
[[Category: Liu Z-J]]
-
[[Category: Liu, Z J.]]
+
[[Category: Richardson DC]]
-
[[Category: Richardson, D C.]]
+
[[Category: Richardson JS]]
-
[[Category: Richardson, J S.]]
+
[[Category: Rose JP]]
-
[[Category: Rose, J P.]]
+
[[Category: Schubot FD]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Shah A]]
-
[[Category: Schubot, F D.]]
+
[[Category: Tempel W]]
-
[[Category: Shah, A.]]
+
[[Category: Wang B-C]]
-
[[Category: Tempel, W.]]
+
-
[[Category: Wang, B C.]]
+
-
[[Category: ZN]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: pyrococcus furiosus]]
+
-
[[Category: rubrerythrin]]
+
-
[[Category: secsg]]
+
-
[[Category: southeast collaboratory for structural genomics]]
+
-
[[Category: structural genomics]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:08:02 2008''
+

Current revision

rubrerythrin from Pyrococcus furiosus Pfu-1210814

PDB ID 1nnq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1nnq"
Personal tools