1ro6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:24, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ro6.png|left|200px]]
 
-
{{STRUCTURE_1ro6| PDB=1ro6 | SCENE= }}
+
==Crystal structure of PDE4B2B complexed with Rolipram (R & S)==
-
 
+
<StructureSection load='1ro6' size='340' side='right'caption='[[1ro6]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of PDE4B2B complexed with Rolipram (R & S)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1ro6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RO6 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_15003452}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARS:ARSENIC'>ARS</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=ROL:ROLIPRAM'>ROL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ro6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ro6 OCA], [https://pdbe.org/1ro6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ro6 RCSB], [https://www.ebi.ac.uk/pdbsum/1ro6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ro6 ProSAT]</span></td></tr>
-
[[1ro6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RO6 OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PDE4B_HUMAN PDE4B_HUMAN] Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in mediating central nervous system effects of therapeutic agents ranging from antidepressants to antiasthmatic and anti-inflammatory agents.<ref>PMID:10846163</ref> <ref>PMID:15003452</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ro/1ro6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ro6 ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Phosphodiesterase|Phosphodiesterase]]
+
*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:015003452</ref><references group="xtra"/>
+
__TOC__
-
[[Category: 3',5'-cyclic-nucleotide phosphodiesterase]]
+
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Lambert, M H.]]
+
[[Category: Large Structures]]
-
[[Category: Nolte, R T.]]
+
[[Category: Lambert MH]]
-
[[Category: Rocque, W J.]]
+
[[Category: Nolte RT]]
-
[[Category: Vanderwall, D E.]]
+
[[Category: Rocque WJ]]
-
[[Category: Xu, R X.]]
+
[[Category: Vanderwall DE]]
-
[[Category: Crystal]]
+
[[Category: Xu RX]]
-
[[Category: Hydrolase]]
+
-
[[Category: Pde]]
+
-
[[Category: Rolipram]]
+

Current revision

Crystal structure of PDE4B2B complexed with Rolipram (R & S)

PDB ID 1ro6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools