This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1q6c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:29, 13 March 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1q6c.png|left|200px]]
 
-
{{STRUCTURE_1q6c| PDB=1q6c | SCENE= }}
+
==Crystal Structure of Soybean Beta-Amylase Complexed with Maltose==
-
 
+
<StructureSection load='1q6c' size='340' side='right'caption='[[1q6c]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
-
===Crystal Structure of Soybean Beta-Amylase Complexed with Maltose===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1q6c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q6C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q6C FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_14638688}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900001:alpha-maltose'>PRD_900001</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q6c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q6c OCA], [https://pdbe.org/1q6c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q6c RCSB], [https://www.ebi.ac.uk/pdbsum/1q6c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q6c ProSAT]</span></td></tr>
-
[[1q6c]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q6C OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AMYB_SOYBN AMYB_SOYBN]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q6/1q6c_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q6c ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Alpha-Amylase|Alpha-Amylase]]
+
*[[Amylase 3D structures|Amylase 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:014638688</ref><references group="xtra"/>
+
-
[[Category: Beta-amylase]]
+
[[Category: Glycine max]]
[[Category: Glycine max]]
-
[[Category: Adachi, M.]]
+
[[Category: Large Structures]]
-
[[Category: Hirata, A.]]
+
[[Category: Adachi M]]
-
[[Category: Kang, Y N.]]
+
[[Category: Hirata A]]
-
[[Category: Mikami, B.]]
+
[[Category: Kang YN]]
-
[[Category: Sekine, A.]]
+
[[Category: Mikami B]]
-
[[Category: Utsumi, S.]]
+
[[Category: Sekine A]]
-
[[Category: Beta-alpha-barrel]]
+
[[Category: Utsumi S]]
-
[[Category: Beta-amylase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Maltose complex]]
+

Current revision

Crystal Structure of Soybean Beta-Amylase Complexed with Maltose

PDB ID 1q6c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools