This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2g4z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:26, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2g4z.png|left|200px]]
 
-
{{STRUCTURE_2g4z| PDB=2g4z | SCENE= }}
+
==anomalous substructure of thermolysin==
-
 
+
<StructureSection load='2g4z' size='340' side='right'caption='[[2g4z]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
-
===anomalous substructure of thermolysin===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2g4z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G4Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G4Z FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_17327674}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g4z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g4z OCA], [https://pdbe.org/2g4z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g4z RCSB], [https://www.ebi.ac.uk/pdbsum/2g4z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g4z ProSAT]</span></td></tr>
-
[[2g4z]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G4Z OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/THER_BACTH THER_BACTH] Extracellular zinc metalloprotease.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g4/2g4z_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g4z ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Thermolysin|Thermolysin]]
+
*[[Thermolysin 3D structures|Thermolysin 3D structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:017327674</ref><references group="xtra"/>
+
[[Category: Bacillus thermoproteolyticus]]
[[Category: Bacillus thermoproteolyticus]]
-
[[Category: Thermolysin]]
+
[[Category: Large Structures]]
-
[[Category: Mueller-Dieckmann, C.]]
+
[[Category: Mueller-Dieckmann C]]
-
[[Category: Weiss, M S.]]
+
[[Category: Weiss MS]]
-
[[Category: Anomalous substructure of thermolysin]]
+
-
[[Category: Hydrolase]]
+

Current revision

anomalous substructure of thermolysin

PDB ID 2g4z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools