1o0w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:55, 22 May 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1o0w.gif|left|200px]]<br /><applet load="1o0w" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1o0w, resolution 2.00&Aring;" />
 
-
'''Crystal structure of Ribonuclease III (TM1102) from Thermotoga maritima at 2.0 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of Ribonuclease III (TM1102) from Thermotoga maritima at 2.0 A resolution==
-
1O0W is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Active as [http://en.wikipedia.org/wiki/Ribonuclease_III Ribonuclease III], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.26.3 3.1.26.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O0W OCA].
+
<StructureSection load='1o0w' size='340' side='right'caption='[[1o0w]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
[[Category: Ribonuclease III]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1o0w]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1O0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1O0W FirstGlance]. <br>
-
[[Category: Thermotoga maritima]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1o0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1o0w OCA], [https://pdbe.org/1o0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1o0w RCSB], [https://www.ebi.ac.uk/pdbsum/1o0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1o0w ProSAT], [https://www.topsan.org/Proteins/JCSG/1o0w TOPSAN]</span></td></tr>
-
[[Category: jcsg]]
+
</table>
-
[[Category: joint center for structural genomics]]
+
== Function ==
-
[[Category: protein structure initiative]]
+
[https://www.uniprot.org/uniprot/RNC_THEMA RNC_THEMA] Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Probably processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.<ref>PMID:20677811</ref>
-
[[Category: psi]]
+
== Evolutionary Conservation ==
-
[[Category: ribonuclease iii]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: structural genomics]]
+
Check<jmol>
-
[[Category: tm1102]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/o0/1o0w_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1o0w ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:12:08 2008''
+
==See Also==
 +
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermotoga maritima]]

Current revision

Crystal structure of Ribonuclease III (TM1102) from Thermotoga maritima at 2.0 A resolution

PDB ID 1o0w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools