3ilw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 6 September 2023) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ilw.png|left|200px]]
 
-
{{STRUCTURE_3ilw| PDB=3ilw | SCENE= }}
+
==Structure of DNA gyrase subunit A N-terminal domain==
-
 
+
<StructureSection load='3ilw' size='340' side='right'caption='[[3ilw]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
===Structure of DNA gyrase subunit A N-terminal domain===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3ilw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ILW FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.603&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
[[3ilw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ILW OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ilw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ilw OCA], [https://pdbe.org/3ilw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ilw RCSB], [https://www.ebi.ac.uk/pdbsum/3ilw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ilw ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GYRA_MYCTU GYRA_MYCTU] DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/il/3ilw_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ilw ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Gyrase|Gyrase]]
+
*[[Gyrase 3D Structures|Gyrase 3D Structures]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:019787774</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Mycobacterium tuberculosis]]
+
-
[[Category: Berger, J M.]]
+
-
[[Category: Schoeffler, A J.]]
+
-
[[Category: TBSGC, TB Structural Genomics Consortium.]]
+
-
[[Category: Tretter, E M.]]
+
-
[[Category: Weisfield, S R.]]
+
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Breakage-reunion domain]]
+
-
[[Category: Dna topology]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Gyrase]]
+
-
[[Category: Isomerase]]
+
[[Category: Mycobacterium tuberculosis]]
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Nucleotide-binding]]
+
[[Category: Berger JM]]
-
[[Category: Structural genomic]]
+
[[Category: Schoeffler AJ]]
-
[[Category: Tb structural genomics consortium]]
+
[[Category: Tretter EM]]
-
[[Category: Tbsgc]]
+
[[Category: Weisfield SR]]
-
[[Category: Topoisomerase]]
+

Current revision

Structure of DNA gyrase subunit A N-terminal domain

PDB ID 3ilw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools