This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1g03
From Proteopedia
(Difference between revisions)
m (Protected "1g03" [edit=sysop:move=sysop]) |
|||
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1g03.png|left|200px]] | ||
| - | + | ==NMR STRUCTURE OF N-TERMINAL DOMAIN OF HTLV-I CA1-134== | |
| - | + | <StructureSection load='1g03' size='340' side='right'caption='[[1g03]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1g03]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_T-cell_leukemia_virus_type_I Human T-cell leukemia virus type I]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G03 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G03 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g03 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g03 OCA], [https://pdbe.org/1g03 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g03 RCSB], [https://www.ebi.ac.uk/pdbsum/1g03 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g03 ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1g03]] is a 1 chain structure with sequence from [ | + | == Function == |
| + | [https://www.uniprot.org/uniprot/GAG_HTL1M GAG_HTL1M] Matrix protein p19 targets Gag, Gag-Pro and Gag-Pro-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex (By similarity). Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity). Nucleocapsid protein p15 is involved in the packaging and encapsidation of two copies of the genome (By similarity). | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g0/1g03_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g03 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
| - | *[[Virus coat | + | *[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] |
| - | + | __TOC__ | |
| - | + | </StructureSection> | |
| - | + | [[Category: Human T-cell leukemia virus type I]] | |
| - | [[Category: Human | + | [[Category: Large Structures]] |
| - | [[Category: Bouamr | + | [[Category: Bouamr F]] |
| - | [[Category: Carter | + | [[Category: Carter C]] |
| - | [[Category: Cornilescu | + | [[Category: Cornilescu CC]] |
| - | [[Category: Tjandra | + | [[Category: Tjandra N]] |
| - | [[Category: Yao | + | [[Category: Yao X]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR STRUCTURE OF N-TERMINAL DOMAIN OF HTLV-I CA1-134
| |||||||||||
