2p1m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2p1m" [edit=sysop:move=sysop])
Current revision (09:07, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p1m.png|left|200px]]
 
-
{{STRUCTURE_2p1m| PDB=2p1m | SCENE= }}
+
==TIR1-ASK1 complex structure==
-
 
+
<StructureSection load='2p1m' size='340' side='right'caption='[[2p1m]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===TIR1-ASK1 complex structure===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2p1m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P1M FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_17410169}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IHP:INOSITOL+HEXAKISPHOSPHATE'>IHP</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p1m OCA], [https://pdbe.org/2p1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p1m RCSB], [https://www.ebi.ac.uk/pdbsum/2p1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p1m ProSAT]</span></td></tr>
-
[[2p1m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P1M OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SKP1A_ARATH SKP1A_ARATH] Involved in ubiquitination and subsequent proteasomal degradation of target proteins. Together with CUL1, RBX1 and a F-box protein, it forms a SCF E3 ubiquitin ligase complex. The functional specificity of this complex depends of the type of F-box protein. In the SCF complex, it serves as an adapter that links the F-box protein to CUL1. SCF(UFO) is required for vegetative and floral organ development as well as for male gametogenesis. SCF(TIR1) is involved in auxin signaling pathway. SCF(COI1) regulates responses to jasmonates. SCF(EID1) and SCF(AFR) are implicated in phytochrome A light signaling. SCF(ADO1), SCF(ADO2), SCF(ADO3) are related to the circadian clock. SCF(ORE9) seems to be involved in senescence. SCF(EBF1/EBF2) may regulate ethylene signaling. Plays a role during embryogenesis and early postembryonic development, especially during cell elongation and division. Contributes to the correct chromosome segregation during tetrad formation.<ref>PMID:10528262</ref> <ref>PMID:10398681</ref> <ref>PMID:10500191</ref> <ref>PMID:11526079</ref> <ref>PMID:12970487</ref> <ref>PMID:14688296</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p1/2p1m_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p1m ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Transport inhibitor response 1|Transport inhibitor response 1]]
*[[Transport inhibitor response 1|Transport inhibitor response 1]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:017410169</ref><references group="xtra"/>
+
__TOC__
 +
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Calderon-Villalobos, L I.A.]]
+
[[Category: Large Structures]]
-
[[Category: Estelle, M.]]
+
[[Category: Calderon-Villalobos LIA]]
-
[[Category: Robinson, C V.]]
+
[[Category: Estelle M]]
-
[[Category: Sharon, M.]]
+
[[Category: Robinson CV]]
-
[[Category: Tan, X.]]
+
[[Category: Sharon M]]
-
[[Category: Zheng, N.]]
+
[[Category: Tan X]]
-
[[Category: F-box]]
+
[[Category: Zheng N]]
-
[[Category: Leucine rich repeat]]
+
-
[[Category: Signaling protein]]
+

Current revision

TIR1-ASK1 complex structure

PDB ID 2p1m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools