1ap7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1ap7" [edit=sysop:move=sysop])
Current revision (08:15, 22 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ap7.png|left|200px]]
 
-
{{STRUCTURE_1ap7| PDB=1ap7 | SCENE= }}
+
==P19-INK4D FROM MOUSE, NMR, 20 STRUCTURES==
 +
<StructureSection load='1ap7' size='340' side='right'caption='[[1ap7]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1ap7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AP7 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ap7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ap7 OCA], [https://pdbe.org/1ap7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ap7 RCSB], [https://www.ebi.ac.uk/pdbsum/1ap7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ap7 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CDN2D_MOUSE CDN2D_MOUSE] Interacts strongly with CDK4 and CDK6 and inhibits them.<ref>PMID:7739547</ref> <ref>PMID:7739548</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/1ap7_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ap7 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
In cancer, the biochemical pathways that are dominated by the two tumour-suppressor proteins, p53 and Rb, are the most frequently disrupted. Cyclin D-dependent kinases phosphorylate Rb to control its activity and they are, in turn, specifically inhibited by the Ink4 family of cyclin-dependent kinase inhibitors (CDKIs) which cause arrest at the G1 phase of the cell cycle. Mutations in Rb, cyclin D1, its catalytic subunit Cdk4, and the CDKI p16Ink4a, which alter the protein or its level of expression, are all strongly implicated in cancer. This suggests that the Rb 'pathway' is of particular importance. Here we report the structure of the p19Ink4d protein, determined by NMR spectroscopy. The structure indicates that most mutations to the p16Ink4a gene, which result in loss of function, are due to incorrectly folded and/or insoluble proteins. We propose a model for the interaction of Ink4 proteins with D-type cyclin-Cdk4/6 complexes that might provide a basis for the design of therapeutics against cancer. The sequences of the Ink4 family of CDKIs are highly conserved
-
===P19-INK4D FROM MOUSE, NMR, 20 STRUCTURES===
+
Structure of the cyclin-dependent kinase inhibitor p19Ink4d.,Luh FY, Archer SJ, Domaille PJ, Smith BO, Owen D, Brotherton DH, Raine AR, Xu X, Brizuela L, Brenner SL, Laue ED Nature. 1997 Oct 30;389(6654):999-1003. PMID:9353127<ref>PMID:9353127</ref>
-
{{ABSTRACT_PUBMED_9353127}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1ap7" style="background-color:#fffaf0;"></div>
-
[[1ap7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AP7 OCA].
+
== References ==
-
 
+
<references/>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:009353127</ref><references group="xtra"/>
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Archer, S J.]]
+
[[Category: Archer SJ]]
-
[[Category: Domaille, P J.]]
+
[[Category: Domaille PJ]]
-
[[Category: Laue, E D.]]
+
[[Category: Laue ED]]
-
[[Category: Luh, F Y.]]
+
[[Category: Luh FY]]
-
[[Category: Smith, B O.]]
+
[[Category: Smith BO]]
-
[[Category: Ankyrin repeat]]
+
-
[[Category: Cdki]]
+
-
[[Category: Cell cycle inhibitor]]
+
-
[[Category: Cyclin dependent kinase inhibitor]]
+
-
[[Category: Ink]]
+

Current revision

P19-INK4D FROM MOUSE, NMR, 20 STRUCTURES

PDB ID 1ap7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools