This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1aij

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:30, 7 February 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1aij.png|left|200px]]
 
-
{{STRUCTURE_1aij| PDB=1aij | SCENE= }}
+
==PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE==
-
 
+
<StructureSection load='1aij' size='340' side='right'caption='[[1aij]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
===PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1aij]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Cereibacter_sphaeroides Cereibacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AIJ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_9115209}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1aij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1aij OCA], [https://pdbe.org/1aij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1aij RCSB], [https://www.ebi.ac.uk/pdbsum/1aij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1aij ProSAT]</span></td></tr>
-
[[1aij]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AIJ OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/RCEL_CERSP RCEL_CERSP] The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
-
<ref group="xtra">PMID:009115209</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Rhodobacter sphaeroides]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Abresch, E.]]
+
Check<jmol>
-
[[Category: Feher, G.]]
+
<jmolCheckbox>
-
[[Category: Mcphillips, T M.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ai/1aij_consurf.spt"</scriptWhenChecked>
-
[[Category: Rees, D C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Soltis, S M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Stowell, M H.B.]]
+
</jmolCheckbox>
-
[[Category: Charge neutral]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1aij ConSurf].
-
[[Category: Integral membrane protein]]
+
<div style="clear:both"></div>
-
[[Category: Photosynthetic reaction center]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Cereibacter sphaeroides]]
 +
[[Category: Large Structures]]
 +
[[Category: Abresch E]]
 +
[[Category: Feher G]]
 +
[[Category: Mcphillips TM]]
 +
[[Category: Rees DC]]
 +
[[Category: Soltis SM]]
 +
[[Category: Stowell MHB]]

Current revision

PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE

PDB ID 1aij

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools