1c1k

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1c1k" [edit=sysop:move=sysop])
Current revision (06:40, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1c1k.png|left|200px]]
 
-
{{STRUCTURE_1c1k| PDB=1c1k | SCENE= }}
+
==BACTERIOPHAGE T4 GENE 59 HELICASE ASSEMBLY PROTEIN==
-
 
+
<StructureSection load='1c1k' size='340' side='right'caption='[[1c1k]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
-
===BACTERIOPHAGE T4 GENE 59 HELICASE ASSEMBLY PROTEIN===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1c1k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C1K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1C1K FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10669611}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IR:IRIDIUM+ION'>IR</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1c1k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1c1k OCA], [https://pdbe.org/1c1k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1c1k RCSB], [https://www.ebi.ac.uk/pdbsum/1c1k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1c1k ProSAT]</span></td></tr>
-
[[1c1k]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t4 Enterobacteria phage t4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1C1K OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/HLOAD_BPT4 HLOAD_BPT4] DNA helicase loader protein that participates in viral DNA replication, recombination, and repair (PubMed:10871615). At the fork, required for loading of the replicative helicase onto DNA protected by the ssDNA-binding protein (PubMed:11459967, PubMed:7806533, PubMed:10871615, PubMed:22427673). Coordinates simultaneous synthesis of leading- and lagging-strands (PubMed:11459969).[HAMAP-Rule:MF_04156]<ref>PMID:10871615</ref> <ref>PMID:11459967</ref> <ref>PMID:22427673</ref> <ref>PMID:7806533</ref> <ref>PMID:11459969</ref>
-
<ref group="xtra">PMID:010669611</ref><ref group="xtra">PMID:014695246</ref><ref group="xtra">PMID:015048824</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Enterobacteria phage t4]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Hyde, C C.]]
+
Check<jmol>
-
[[Category: Jones, C E.]]
+
<jmolCheckbox>
-
[[Category: Mueser, T C.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/1c1k_consurf.spt"</scriptWhenChecked>
-
[[Category: Nossal, N G.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Dna binding protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Dna recombination]]
+
</jmolCheckbox>
-
[[Category: Dna replication]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1c1k ConSurf].
-
[[Category: Forked dna]]
+
<div style="clear:both"></div>
-
[[Category: Helicase assembly]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Escherichia virus T4]]
 +
[[Category: Large Structures]]
 +
[[Category: Hyde CC]]
 +
[[Category: Jones CE]]
 +
[[Category: Mueser TC]]
 +
[[Category: Nossal NG]]

Current revision

BACTERIOPHAGE T4 GENE 59 HELICASE ASSEMBLY PROTEIN

PDB ID 1c1k

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools