1d9e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:50, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1d9e.png|left|200px]]
 
-
{{STRUCTURE_1d9e| PDB=1d9e | SCENE= }}
+
==STRUCTURE OF E. COLI KDO8P SYNTHASE==
 +
<StructureSection load='1d9e' size='340' side='right'caption='[[1d9e]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1d9e]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D9E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D9E FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d9e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d9e OCA], [https://pdbe.org/1d9e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d9e RCSB], [https://www.ebi.ac.uk/pdbsum/1d9e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d9e ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KDSA_ECOLI KDSA_ECOLI] Synthesis of KDO 8-P which is required for lipid A maturation and cellular growth.[HAMAP-Rule:MF_00056]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d9/1d9e_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d9e ConSurf].
 +
<div style="clear:both"></div>
-
===STRUCTURE OF E. COLI KDO8P SYNTHASE===
+
==See Also==
-
 
+
*[[Kdo-8-phosphate synthase|Kdo-8-phosphate synthase]]
-
{{ABSTRACT_PUBMED_10734095}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[1d9e]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D9E OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:010734095</ref><references group="xtra"/>
+
-
[[Category: 3-deoxy-8-phosphooctulonate synthase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Dastidar, P.]]
+
[[Category: Large Structures]]
-
[[Category: Gatti, D L.]]
+
[[Category: Dastidar P]]
-
[[Category: Patel, M.]]
+
[[Category: Gatti DL]]
-
[[Category: Radaev, S.]]
+
[[Category: Patel M]]
-
[[Category: Woodard, R W.]]
+
[[Category: Radaev S]]
-
[[Category: A5p]]
+
[[Category: Woodard RW]]
-
[[Category: Dah7p]]
+
-
[[Category: Kdo]]
+
-
[[Category: Kdo8p]]
+
-
[[Category: Lyase]]
+
-
[[Category: Pep]]
+
-
[[Category: Tim barrel]]
+

Current revision

STRUCTURE OF E. COLI KDO8P SYNTHASE

PDB ID 1d9e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools