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3gy1

From Proteopedia

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[[Image:3gy1.png|left|200px]]
 
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{{STRUCTURE_3gy1| PDB=3gy1 | SCENE= }}
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==CRYSTAL STRUCTURE OF putative mandelate racemase/muconate lactonizing protein from Clostridium beijerinckii NCIMB 8052==
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<StructureSection load='3gy1' size='340' side='right'caption='[[3gy1]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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===CRYSTAL STRUCTURE OF putative mandelate racemase/muconate lactonizing protein from Clostridium beijerinckii NCIMB 8052===
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3gy1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_beijerinckii_NCIMB_8052 Clostridium beijerinckii NCIMB 8052]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GY1 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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==About this Structure==
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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[[3gy1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_beijerinckii_ncimb_8052 Clostridium beijerinckii ncimb 8052]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GY1 OCA].
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gy1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gy1 OCA], [https://pdbe.org/3gy1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gy1 RCSB], [https://www.ebi.ac.uk/pdbsum/3gy1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gy1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gy1 TOPSAN]</span></td></tr>
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[[Category: Clostridium beijerinckii ncimb 8052]]
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</table>
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[[Category: Almo, S C.]]
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== Function ==
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[[Category: Burley, S K.]]
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[https://www.uniprot.org/uniprot/IMAND_CLOB8 IMAND_CLOB8] Has no detectable activity with D-mannonate and with a panel of 70 other acid sugars (in vitro), in spite of the conservation of the residues that are expected to be important for catalytic activity and cofactor binding. May have evolved a divergent function.<ref>PMID:24697546</ref>
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[[Category: Malashkevich, V N.]]
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== Evolutionary Conservation ==
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[[Category: Morano, C.]]
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[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
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Check<jmol>
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[[Category: Sauder, J M.]]
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<jmolCheckbox>
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[[Category: Toro, R.]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gy/3gy1_consurf.spt"</scriptWhenChecked>
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[[Category: Clostridium beijerinckii ncimb 8052]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Crystal structure]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Enolase]]
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</jmolCheckbox>
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[[Category: Isomerase]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gy1 ConSurf].
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[[Category: Mandelate racemase/muconate lactonizing protein]]
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<div style="clear:both"></div>
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[[Category: New york sgx research center for structural genomic]]
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== References ==
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[[Category: Nysgxrc]]
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<references/>
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[[Category: Protein structure initiative]]
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__TOC__
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[[Category: Psi-2]]
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</StructureSection>
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[[Category: Structural genomic]]
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[[Category: Clostridium beijerinckii NCIMB 8052]]
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[[Category: Large Structures]]
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[[Category: Almo SC]]
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[[Category: Burley SK]]
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[[Category: Malashkevich VN]]
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[[Category: Morano C]]
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[[Category: Sauder JM]]
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[[Category: Toro R]]

Current revision

CRYSTAL STRUCTURE OF putative mandelate racemase/muconate lactonizing protein from Clostridium beijerinckii NCIMB 8052

PDB ID 3gy1

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