3ed4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:46, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ed4.png|left|200px]]
 
-
{{STRUCTURE_3ed4| PDB=3ed4 | SCENE= }}
+
==Crystal structure of putative arylsulfatase from escherichia coli==
-
 
+
<StructureSection load='3ed4' size='340' side='right'caption='[[3ed4]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
===Crystal structure of putative arylsulfatase from escherichia coli===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3ed4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ED4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ED4 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-
[[3ed4]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ED4 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ed4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ed4 OCA], [https://pdbe.org/3ed4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ed4 RCSB], [https://www.ebi.ac.uk/pdbsum/3ed4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ed4 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3ed4 TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H2V4H2_ECOL6 A0A0H2V4H2_ECOL6]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/3ed4_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ed4 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Almo, S C.]]
+
[[Category: Large Structures]]
-
[[Category: Bain, K.]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K.]]
+
[[Category: Bain K]]
-
[[Category: Chang, S.]]
+
[[Category: Burley SK]]
-
[[Category: Gilmore, M.]]
+
[[Category: Chang S]]
-
[[Category: Koss, J.]]
+
[[Category: Gilmore M]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Koss J]]
-
[[Category: Ozyurt, S.]]
+
[[Category: Ozyurt S]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Patskovsky Y]]
-
[[Category: Sauder, J M.]]
+
[[Category: Sauder JM]]
-
[[Category: Wasserman, S.]]
+
[[Category: Wasserman S]]
-
[[Category: New york sgx research center for structural genomic]]
+
-
[[Category: New york structural genomix research consortium]]
+
-
[[Category: Nysgxrc]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Sulfatase]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of putative arylsulfatase from escherichia coli

PDB ID 3ed4

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools