4gtv

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[[Image:4gtv.jpg|left|200px]]
 
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{{STRUCTURE_4gtv| PDB=4gtv | SCENE= }}
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==Engineered RabGGTase in complex with BMS analogue 13==
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<StructureSection load='4gtv' size='340' side='right'caption='[[4gtv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4gtv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GTV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GTV FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7TR:4-({(3R)-7-CYANO-4-[(4-METHOXYPHENYL)SULFONYL]-1-[(1-METHYL-1H-IMIDAZOL-5-YL)METHYL]-2,3,4,5-TETRAHYDRO-1H-1,4-BENZODIAZEPIN-3-YL}METHYL)PHENYL+DIETHYLCARBAMATE'>7TR</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gtv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gtv OCA], [https://pdbe.org/4gtv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gtv RCSB], [https://www.ebi.ac.uk/pdbsum/4gtv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gtv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PGTA_RAT PGTA_RAT] Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal, such as RAB1A, RAB3A and RAB5A respectively.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Members of the Ras superfamily of small GTPases are frequently mutated in cancer. Therefore, inhibitors have been developed to address the acitivity of these GTPases by inhibiting their prenylating enzymes FTase, GGTase I, and RabGGTase. In contrast to FTase and GGTase I, only a handful of RabGGTase inhibitors have been developed. The most active RabGGTase inhibitor known until recently was an FTase inhibitor which hit RabGGTase as an off-target. We recently reported our efforts to tune the selectivity of these inhibitors toward RabGGTase. Here we describe an extended set of selective inhibitors. The requirements for selective RabGGTase inhibitors are described in detail, guided by multiple crystal structures. In order to relate in vitro and cellular activity, a high-throughput assay system to detect the attachment of [(3)H]geranylgeranyl groups to Rab was used. Selective RabGGTase inhibition allows the establishment of novel drug discovery programs aimed at the development of anticancer therapeutics.
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===Engineered RabGGTase in complex with BMS analogue 13===
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Development of Selective, Potent RabGGTase Inhibitors.,Stigter EA, Guo Z, Bon RS, Wu YW, Choidas A, Wolf A, Menninger S, Waldmann H, Blankenfeldt W, Goody RS J Med Chem. 2012 Oct 11;55(19):8330-40. doi: 10.1021/jm300624s. Epub 2012 Oct 3. PMID:22963166<ref>PMID:22963166</ref>
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{{ABSTRACT_PUBMED_22963166}}
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4gtv" style="background-color:#fffaf0;"></div>
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==About this Structure==
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==See Also==
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[[4gtv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GTV OCA].
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*[[Geranylgeranyl transferase 3D structures|Geranylgeranyl transferase 3D structures]]
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[[Category: Protein geranylgeranyltransferase type II]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Blankenfeldt, W.]]
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[[Category: Blankenfeldt W]]
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[[Category: Bon, R S.]]
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[[Category: Bon RS]]
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[[Category: Goody, R S.]]
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[[Category: Goody RS]]
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[[Category: Guo, Z.]]
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[[Category: Guo Z]]
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[[Category: Stigter, E A.]]
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[[Category: Stigter EA]]
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[[Category: Waldmann, H.]]
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[[Category: Waldmann H]]
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[[Category: Inhibitor]]
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[[Category: Protein prenylation]]
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[[Category: Transferase-transferase inhibitor complex]]
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Current revision

Engineered RabGGTase in complex with BMS analogue 13

PDB ID 4gtv

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