4hql
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4hql is ON HOLD Authors: Song, G. , Koksal, A.C., Lu, C., Springer, T. A. Description: Crystal structure of magnesium loaded plasmodium vivax TRAP ...) |
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of magnesium-loaded Plasmodium vivax TRAP protein== | |
+ | <StructureSection load='4hql' size='340' side='right'caption='[[4hql]], [[Resolution|resolution]] 2.24Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4hql]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HQL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HQL FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.241Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hql FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hql OCA], [https://pdbe.org/4hql PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hql RCSB], [https://www.ebi.ac.uk/pdbsum/4hql PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hql ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q9TVF0_PLAVI Q9TVF0_PLAVI] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Sporozoite gliding motility and invasion of mosquito and vertebrate host cells in malaria is mediated by thrombospondin repeat anonymous protein (TRAP). Tandem von Willebrand factor A (VWA) and thrombospondin type I repeat (TSR) domains in TRAP connect through proline-rich stalk, transmembrane, and cytoplasmic domains to the parasite actin-dependent motility apparatus. We crystallized fragments containing the VWA and TSR domains from Plasmodium vivax and Plasmodium falciparum in different crystal lattices. TRAP VWA domains adopt closed and open conformations, and bind a Mg(2+) ion at a metal ion-dependent adhesion site implicated in ligand binding. Metal ion coordination in the open state is identical to that seen in the open high-affinity state of integrin I domains. The closed VWA conformation associates with a disordered TSR domain. In contrast, the open VWA conformation crystallizes with an extensible beta ribbon and ordered TSR domain. The extensible beta ribbon is composed of disulfide-bonded segments N- and C-terminal to the VWA domain that are largely drawn out of the closed VWA domain in a 15 A movement to the open conformation. The extensible beta ribbon and TSR domain overlap at a conserved interface. The VWA, extensible beta ribbon, and TSR domains adopt a highly elongated overall orientation that would be stabilized by tensile force exerted across a ligand-receptor complex by the actin motility apparatus of the sporozoite. Our results provide insights into regulation of "stick-and-slip" parasite motility and for development of sporozoite subunit vaccines. | ||
- | + | Shape change in the receptor for gliding motility in Plasmodium sporozoites.,Song G, Koksal AC, Lu C, Springer TA Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21420-5. doi:, 10.1073/pnas.1218581109. Epub 2012 Dec 11. PMID:23236185<ref>PMID:23236185</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
+ | </div> | ||
+ | <div class="pdbe-citations 4hql" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Plasmodium vivax]] | ||
+ | [[Category: Koksal AC]] | ||
+ | [[Category: Lu C]] | ||
+ | [[Category: Song G]] | ||
+ | [[Category: Springer TA]] |
Current revision
Crystal structure of magnesium-loaded Plasmodium vivax TRAP protein
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