1dxg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1dxg" [edit=sysop:move=sysop])
Current revision (07:00, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1dxg.png|left|200px]]
 
-
{{STRUCTURE_1dxg| PDB=1dxg | SCENE= }}
+
==CRYSTAL STRUCTURE OF DESULFOREDOXIN FROM DESULFOVIBRIO GIGAS AT 1.8 A RESOLUTION==
-
 
+
<StructureSection load='1dxg' size='340' side='right'caption='[[1dxg]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF DESULFOREDOXIN FROM DESULFOVIBRIO GIGAS AT 1.8 A RESOLUTION===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1dxg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Megalodesulfovibrio_gigas Megalodesulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DXG FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_7666420}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dxg OCA], [https://pdbe.org/1dxg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dxg RCSB], [https://www.ebi.ac.uk/pdbsum/1dxg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dxg ProSAT]</span></td></tr>
-
[[1dxg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_gigas Desulfovibrio gigas]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DXG OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/DESR_MEGGA DESR_MEGGA] Nonheme iron protein possibly involved in electron transport.
-
<ref group="xtra">PMID:007666420</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Desulfovibrio gigas]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Archer, M.]]
+
Check<jmol>
-
[[Category: Huber, R.]]
+
<jmolCheckbox>
-
[[Category: Romao, M J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/1dxg_consurf.spt"</scriptWhenChecked>
-
[[Category: Electron transport]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Non-heme iron protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Rubredoxin type metal center]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dxg ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Megalodesulfovibrio gigas]]
 +
[[Category: Archer M]]
 +
[[Category: Huber R]]
 +
[[Category: Romao MJ]]

Current revision

CRYSTAL STRUCTURE OF DESULFOREDOXIN FROM DESULFOVIBRIO GIGAS AT 1.8 A RESOLUTION

PDB ID 1dxg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools