We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

4hr2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4hr2" [edit=sysop:move=sysop])
Current revision (15:10, 20 September 2023) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4hr2.jpg|left|200px]]
 
-
{{STRUCTURE_4hr2| PDB=4hr2 | SCENE= }}
+
==Structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to ADP==
 +
<StructureSection load='4hr2' size='340' side='right'caption='[[4hr2]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4hr2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_thailandensis_E264 Burkholderia thailandensis E264]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HR2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HR2 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hr2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hr2 OCA], [https://pdbe.org/4hr2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hr2 RCSB], [https://www.ebi.ac.uk/pdbsum/4hr2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hr2 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NDK_BURTA NDK_BURTA] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity).
-
===Structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to ADP===
+
==See Also==
-
 
+
*[[Nucleoside diphosphate kinase 3D structures|Nucleoside diphosphate kinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[4hr2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_thailandensis_e264 Burkholderia thailandensis e264]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HR2 OCA].
+
[[Category: Burkholderia thailandensis E264]]
-
[[Category: Burkholderia thailandensis e264]]
+
[[Category: Large Structures]]
-
[[Category: Nucleoside-diphosphate kinase]]
+
-
[[Category: SSGCID, Seattle Structural Genomics Center for Infectious Disease.]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Seattle structural genomics center for infectious disease]]
+
-
[[Category: Ssgcid]]
+
-
[[Category: Transferase]]
+

Current revision

Structure of nucleoside diphosphate kinase (NDK) from Burkholderia thailandensis bound to ADP

PDB ID 4hr2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools