This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1eji

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1eji" [edit=sysop:move=sysop])
Current revision (10:03, 20 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1eji.png|left|200px]]
 
-
{{STRUCTURE_1eji| PDB=1eji | SCENE= }}
+
==RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (MOUSE)==
 +
<StructureSection load='1eji' size='340' side='right'caption='[[1eji]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1eji]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EJI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EJI FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PLG:N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]'>PLG</scene>, <scene name='pdbligand=THF:5-HYDROXYMETHYLENE-6-HYDROFOLIC+ACID'>THF</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eji FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eji OCA], [https://pdbe.org/1eji PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eji RCSB], [https://www.ebi.ac.uk/pdbsum/1eji PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eji ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GLYC_MOUSE GLYC_MOUSE] Interconversion of serine and glycine.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ej/1eji_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eji ConSurf].
 +
<div style="clear:both"></div>
-
===RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (MOUSE)===
+
==See Also==
-
 
+
*[[Serine hydroxymethyltransferase 3D structures|Serine hydroxymethyltransferase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[1eji]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EJI OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:011063567</ref><references group="xtra"/>
+
-
[[Category: Glycine hydroxymethyltransferase]]
+
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Kriksunov, I A.]]
+
[[Category: Kriksunov IA]]
-
[[Category: Liu, X.]]
+
[[Category: Liu X]]
-
[[Category: Stover, P J.]]
+
[[Category: Stover PJ]]
-
[[Category: Szebenyi, D M.E.]]
+
[[Category: Szebenyi DME]]
-
[[Category: Thiel, D J.]]
+
[[Category: Thiel DJ]]
-
[[Category: Asymmetric dimer]]
+
-
[[Category: Pyridoxal 5'-phosphate]]
+
-
[[Category: Serine-glycine conversion]]
+
-
[[Category: Tetrahydrofolate]]
+
-
[[Category: Transferase]]
+

Current revision

RECOMBINANT SERINE HYDROXYMETHYLTRANSFERASE (MOUSE)

PDB ID 1eji

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools