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1ems
From Proteopedia
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| - | [[Image:1ems.png|left|200px]] | ||
| - | + | ==CRYSTAL STRUCTURE OF THE C. ELEGANS NITFHIT PROTEIN== | |
| - | + | <StructureSection load='1ems' size='340' side='right'caption='[[1ems]], [[Resolution|resolution]] 2.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1ems]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EMS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EMS FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EMC:ETHYL+MERCURY+ION'>EMC</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | [[1ems]] is a 2 chain structure with sequence from [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ems FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ems OCA], [https://pdbe.org/1ems PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ems RCSB], [https://www.ebi.ac.uk/pdbsum/1ems PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ems ProSAT]</span></td></tr> |
| - | + | </table> | |
| - | == | + | == Function == |
| - | < | + | [https://www.uniprot.org/uniprot/NFT1_CAEEL NFT1_CAEEL] Cleaves A-5'-PPP-5'A to yield AMP and ADP.<ref>PMID:10959838</ref> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/1ems_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ems ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Caenorhabditis elegans]] | [[Category: Caenorhabditis elegans]] | ||
| - | [[Category: Bieganowski | + | [[Category: Large Structures]] |
| - | [[Category: Brenner | + | [[Category: Bieganowski P]] |
| - | [[Category: Croce | + | [[Category: Brenner C]] |
| - | [[Category: Draganescu | + | [[Category: Croce CM]] |
| - | [[Category: Hodawadekar | + | [[Category: Draganescu A]] |
| - | [[Category: Huang | + | [[Category: Hodawadekar SC]] |
| - | [[Category: Pace | + | [[Category: Huang J]] |
| - | [[Category: Pekarsky | + | [[Category: Pace HC]] |
| - | + | [[Category: Pekarsky Y]] | |
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Current revision
CRYSTAL STRUCTURE OF THE C. ELEGANS NITFHIT PROTEIN
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