1eg9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1eg9" [edit=sysop:move=sysop])
Current revision (07:02, 7 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1eg9.png|left|200px]]
 
-
{{STRUCTURE_1eg9| PDB=1eg9 | SCENE= }}
+
==NAPHTHALENE 1,2-DIOXYGENASE WITH INDOLE BOUND IN THE ACTIVE SITE.==
 +
<StructureSection load='1eg9' size='340' side='right'caption='[[1eg9]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1eg9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EG9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=IND:INDOLE'>IND</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eg9 OCA], [https://pdbe.org/1eg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eg9 RCSB], [https://www.ebi.ac.uk/pdbsum/1eg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eg9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/NDOB_PSEPU NDOB_PSEPU] Component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eg/1eg9_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eg9 ConSurf].
 +
<div style="clear:both"></div>
-
===NAPHTHALENE 1,2-DIOXYGENASE WITH INDOLE BOUND IN THE ACTIVE SITE.===
+
==See Also==
-
 
+
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[1eg9]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EG9 OCA].
+
[[Category: Large Structures]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:010669618</ref><references group="xtra"/>
+
-
[[Category: Naphthalene 1,2-dioxygenase]]
+
[[Category: Pseudomonas putida]]
[[Category: Pseudomonas putida]]
-
[[Category: Carredano, E.]]
+
[[Category: Carredano E]]
-
[[Category: Choudhury, D.]]
+
[[Category: Choudhury D]]
-
[[Category: Eklund, H.]]
+
[[Category: Eklund H]]
-
[[Category: Gibson, D T.]]
+
[[Category: Gibson DT]]
-
[[Category: Karlsson, A.]]
+
[[Category: Karlsson A]]
-
[[Category: Kauppi, B.]]
+
[[Category: Kauppi B]]
-
[[Category: Lee, K.]]
+
[[Category: Lee K]]
-
[[Category: Parales, J V.]]
+
[[Category: Parales JV]]
-
[[Category: Parales, R E.]]
+
[[Category: Parales RE]]
-
[[Category: Ramaswamy, S.]]
+
[[Category: Ramaswamy S]]
-
[[Category: Enzyme-substrate complex]]
+
-
[[Category: Non-heme iron dioxygenase]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

NAPHTHALENE 1,2-DIOXYGENASE WITH INDOLE BOUND IN THE ACTIVE SITE.

PDB ID 1eg9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools