2lpx
From Proteopedia
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| - | [[Image:2lpx.png|left|200px]] | ||
| - | + | ==Solution Structure of Strawberry Allergen Fra a 1e== | |
| + | <StructureSection load='2lpx' size='340' side='right'caption='[[2lpx]]' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2lpx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Fragaria_x_ananassa Fragaria x ananassa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LPX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LPX FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lpx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lpx OCA], [https://pdbe.org/2lpx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lpx RCSB], [https://www.ebi.ac.uk/pdbsum/2lpx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lpx ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FRA1E_FRAAN FRA1E_FRAAN] Involved in the control of flavonoid biosynthesis in fruits, probably by binding directly to natural flavonoids (PubMed:19969523). Binds the natural flavonoid quercetin-3-O-glucuronide with affinities in the low micromolar range (PubMed:24133217).<ref>PMID:19969523</ref> <ref>PMID:24133217</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The PR10 family protein Fra a 1E from strawberry (Fragaria x ananassa) is down-regulated in white strawberry mutants, and transient RNAi (RNA interference)-mediated silencing experiments confirmed that Fra a 1 is involved in fruit pigment synthesis. In the present study, we determined the solution structure of Fra a 1E. The protein fold is identical with that of other members of the PR10 protein family and consists of a seven-stranded antiparallel beta-sheet, two short V-shaped alpha-helices and a long C-terminal alpha-helix that encompass a hydrophobic pocket. Whereas Fra a 1E contains the glycine-rich loop that is highly conserved throughout the protein family, the volume of the hydrophobic pocket and the size of its entrance are much larger than expected. The three-dimensional structure may shed some light on its physiological function and may help to further understand the role of PR10 proteins in plants. | ||
| - | + | Solution structure of the strawberry allergen Fra a 1.,Seutter von Loetzen C, Schweimer K, Schwab W, Rosch P, Hartl-Spiegelhauer O Biosci Rep. 2012 Dec 1;32(6):567-75. doi: 10.1042/BSR20120058. PMID:22913709<ref>PMID:22913709</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | == | + | </div> |
| - | + | <div class="pdbe-citations 2lpx" style="background-color:#fffaf0;"></div> | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Fragaria x ananassa]] | [[Category: Fragaria x ananassa]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Hartl-Spiegelhauer O]] |
| - | [[Category: Roesch | + | [[Category: Roesch P]] |
| - | [[Category: Schwab | + | [[Category: Schwab W]] |
| - | [[Category: Schweimer | + | [[Category: Schweimer K]] |
| - | [[Category: | + | [[Category: Seutter von Loetzen C]] |
| - | + | ||
Current revision
Solution Structure of Strawberry Allergen Fra a 1e
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