4hur

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px {{STRUCTURE_4hur| PDB=4hur | SCENE= }} ===Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in co...)
Current revision (15:11, 20 September 2023) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4hur.jpg|left|200px]]
 
-
{{STRUCTURE_4hur| PDB=4hur | SCENE= }}
+
==Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A==
 +
<StructureSection load='4hur' size='340' side='right'caption='[[4hur]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4hur]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HUR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HUR FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACO:ACETYL+COENZYME+*A'>ACO</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hur FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hur OCA], [https://pdbe.org/4hur PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hur RCSB], [https://www.ebi.ac.uk/pdbsum/4hur PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hur ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/VATA_STAAU VATA_STAAU] Inactivates the A compounds of virginiamycin-like antibiotics, thus providing resistance to these antibiotics.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Combinations of streptogramins of group A and B (i.e. dalfoprisin and quinipristin) are "last-resort" antibiotics for treatment of infections caused by Gram-positive pathogens including methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus faecium. Resistance to streptogramins has arisen via multiple mechanisms, including deactivation of the group A component by the large family of virginamycin O-acetyltransferase (Vat) enzymes. Despite the structural elucidation performed for the VatD acetyltransferase which provided a general molecular framework for activity, detailed characterization of the essential catalytic and antibiotic substrate-binding determinants in Vat enzymes is still lacking. We have determined the crystal structure of S. aureus VatA in apo, virginiamycin M1- and acetyl CoA-bound forms and provide an extensive mutagenesis and functional analysis of the structural determinants required for catalysis and streptogramin A recognition. Based on an updated genomic survey across the Vat enzyme family we identified key conserved residues critical for VatA activity that are not part of the O-acetylation catalytic apparatus. Exploiting such constraints of the Vat active site may lead to development of streptogramin A compounds that evade inactivation by Vat enzymes while retaining binding to their ribosomal target.
-
===Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A===
+
Potential for reduction of streptogramin A resistance revealed by structural analysis of the VatA acetyltransferase.,Stogios PJ, Kuhn ML, Evdokimova E, Courvalin P, Anderson WF, Savchenko A Antimicrob Agents Chemother. 2014 Sep 15. pii: AAC.03743-14. PMID:25223995<ref>PMID:25223995</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
==About this Structure==
+
</div>
-
[[4hur]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HUR OCA].
+
<div class="pdbe-citations 4hur" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
-
[[Category: Anderson, W F.]]
+
[[Category: Anderson WF]]
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
[[Category: Courvalin P]]
-
[[Category: Courvalin, P.]]
+
[[Category: Di Leo R]]
-
[[Category: Evdokimova, E.]]
+
[[Category: Evdokimova E]]
-
[[Category: Krishnamoorthy, M.]]
+
[[Category: Krishnamoorthy M]]
-
[[Category: Leo, R Di.]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G.]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A.]]
+
[[Category: Stogios PJ]]
-
[[Category: Stogios, P J.]]
+
[[Category: Wawrzak Z]]
-
[[Category: Wawrzak, Z.]]
+
[[Category: Yim V]]
-
[[Category: Yim, V.]]
+
-
[[Category: Acetyl coenzyme some]]
+
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Coenzyme some]]
+
-
[[Category: Dalfopristin]]
+
-
[[Category: Hexapeptide repeat acyltransferase]]
+
-
[[Category: Intracellular]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Streptogramin some]]
+
-
[[Category: Streptogramin group a antibiotic acetyltransferase]]
+
-
[[Category: Streptogramin group a antibiotic]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Transferase]]
+
-
[[Category: Virginiamycin m1]]
+

Current revision

Crystal structure of streptogramin group A antibiotic acetyltransferase VatA from Staphylococcus aureus in complex with acetyl coenzyme A

PDB ID 4hur

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools