4h75
From Proteopedia
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| - | [[Image:4h75.png|left|200px]] | ||
| - | + | ==Crystal structure of human Spindlin1 in complex with a histone H3K4(me3) peptide== | |
| + | <StructureSection load='4h75' size='340' side='right'caption='[[4h75]], [[Resolution|resolution]] 2.10Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[4h75]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H75 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4H75 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.098Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=M3L:N-TRIMETHYLLYSINE'>M3L</scene>, <scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4h75 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h75 OCA], [https://pdbe.org/4h75 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4h75 RCSB], [https://www.ebi.ac.uk/pdbsum/4h75 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4h75 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/SPIN1_HUMAN SPIN1_HUMAN] May play a role in cell-cycle regulation during the transition from gamete to embryo (By similarity). | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Recognition of methylated histone tail lysine residues by tudor domains plays important roles in epigenetic control of gene expression and DNA damage response. Previous studies revealed the binding of methyllysine in a cage of aromatic residues, but the molecular mechanism by which the sequence specificity for surrounding histone tail residues is achieved remains poorly understood. In the crystal structure of a trimethylated histone H3 lysine 4 (H3K4) peptide bound to the tudor-like domains of Spindlin1 presented here, an atypical mode of methyllysine recognition by an aromatic pocket of Spindlin1 is observed. Furthermore, the histone sequence is recognized in a distinct manner involving the amino terminus and a pair of arginine residues of histone H3, and disruption of the binding impaired stimulation of pre-RNA expression by Spindlin1. Our analysis demonstrates considerable diversities of methyllysine recognition and sequence-specific binding of histone tails by tudor domains, and the revelation furthers the understanding of tudor domain proteins in deciphering epigenetic marks on histone tails. | ||
| - | + | Distinct mode of methylated lysine-4 of histone H3 recognition by tandem tudor-like domains of Spindlin1.,Yang N, Wang W, Wang Y, Wang M, Zhao Q, Rao Z, Zhu B, Xu RM Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17954-9. doi:, 10.1073/pnas.1208517109. Epub 2012 Oct 17. PMID:23077255<ref>PMID:23077255</ref> | |
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 4h75" style="background-color:#fffaf0;"></div> | ||
| - | == | + | ==See Also== |
| - | [[ | + | *[[Spindlin|Spindlin]] |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Rao | + | [[Category: Large Structures]] |
| - | [[Category: Wang | + | [[Category: Rao Z]] |
| - | [[Category: Wang | + | [[Category: Wang M]] |
| - | [[Category: Wang | + | [[Category: Wang W]] |
| - | [[Category: Xu | + | [[Category: Wang Y]] |
| - | [[Category: Yang | + | [[Category: Xu RM]] |
| - | [[Category: Zhao | + | [[Category: Yang N]] |
| - | [[Category: Zhu | + | [[Category: Zhao Q]] |
| - | + | [[Category: Zhu B]] | |
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Current revision
Crystal structure of human Spindlin1 in complex with a histone H3K4(me3) peptide
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Categories: Homo sapiens | Large Structures | Rao Z | Wang M | Wang W | Wang Y | Xu RM | Yang N | Zhao Q | Zhu B
