This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1f56

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:10, 20 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1f56.png|left|200px]]
 
-
{{STRUCTURE_1f56| PDB=1f56 | SCENE= }}
+
==SPINACH PLANTACYANIN==
-
 
+
<StructureSection load='1f56' size='340' side='right'caption='[[1f56]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
===SPINACH PLANTACYANIN===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1f56]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F56 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F56 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
[[1f56]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Spinacia_oleracea Spinacia oleracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F56 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f56 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f56 OCA], [https://pdbe.org/1f56 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f56 RCSB], [https://www.ebi.ac.uk/pdbsum/1f56 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f56 ProSAT]</span></td></tr>
-
 
+
</table>
-
==Reference==
+
== Function ==
-
<ref group="xtra">PMID:011085657</ref><references group="xtra"/>
+
[https://www.uniprot.org/uniprot/O82080_SPIOL O82080_SPIOL]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f5/1f56_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f56 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Spinacia oleracea]]
[[Category: Spinacia oleracea]]
-
[[Category: Einsle, O.]]
+
[[Category: Einsle O]]
-
[[Category: Mehrabian, Z.]]
+
[[Category: Mehrabian Z]]
-
[[Category: Messerschmidt, A.]]
+
[[Category: Messerschmidt A]]
-
[[Category: Nalbandyan, R.]]
+
[[Category: Nalbandyan R]]
-
[[Category: Beta barrel]]
+
-
[[Category: Copper protein]]
+
-
[[Category: Cupredoxin]]
+
-
[[Category: Plant protein]]
+

Current revision

SPINACH PLANTACYANIN

PDB ID 1f56

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools