3gqu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 21 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3gqu.png|left|200px]]
 
-
{{STRUCTURE_3gqu| PDB=3gqu | SCENE= }}
+
==Pyrococcus Horikoshii NOP5 RNA Binding Domain==
-
 
+
<StructureSection load='3gqu' size='340' side='right'caption='[[3gqu]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
===Pyrococcus Horikoshii NOP5 RNA Binding Domain===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3gqu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GQU FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_19336398}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gqu OCA], [https://pdbe.org/3gqu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gqu RCSB], [https://www.ebi.ac.uk/pdbsum/3gqu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gqu ProSAT]</span></td></tr>
-
[[3gqu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQU OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/O57810_PYRHO O57810_PYRHO]
-
<ref group="xtra">PMID:019336398</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gqu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gqu ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
-
[[Category: Batey, R T.]]
+
[[Category: Batey RT]]
-
[[Category: Hardin, J W.]]
+
[[Category: Hardin JW]]
-
[[Category: Reyes, F E.]]
+
[[Category: Reyes FE]]
-
[[Category: Rna binding domain]]
+
-
[[Category: Rna binding protein]]
+

Current revision

Pyrococcus Horikoshii NOP5 RNA Binding Domain

PDB ID 3gqu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools