This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1fgz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1fgz" [edit=sysop:move=sysop])
Current revision (10:14, 20 March 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1fgz.png|left|200px]]
 
-
{{STRUCTURE_1fgz| PDB=1fgz | SCENE= }}
+
==GRP1 PH DOMAIN (UNLIGANDED)==
-
 
+
<StructureSection load='1fgz' size='340' side='right'caption='[[1fgz]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
===GRP1 PH DOMAIN (UNLIGANDED)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1fgz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FGZ FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_10983985}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fgz OCA], [https://pdbe.org/1fgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fgz RCSB], [https://www.ebi.ac.uk/pdbsum/1fgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fgz ProSAT]</span></td></tr>
-
[[1fgz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FGZ OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/CYH3_MOUSE CYH3_MOUSE] Promotes guanine-nucleotide exchange on ARF1. Promotes the activation of ARF factors through replacement of GDP with GTP.<ref>PMID:18042453</ref>
-
<ref group="xtra">PMID:010983985</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/1fgz_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fgz ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Bose, S.]]
+
[[Category: Bose S]]
-
[[Category: Chawla, A.]]
+
[[Category: Chawla A]]
-
[[Category: Cronin, T.]]
+
[[Category: Cronin T]]
-
[[Category: Czech, M P.]]
+
[[Category: Czech MP]]
-
[[Category: Klarlund, J.]]
+
[[Category: Klarlund J]]
-
[[Category: Lambright, D G.]]
+
[[Category: Lambright DG]]
-
[[Category: Lietzke, S E.]]
+
[[Category: Lietzke SE]]
-
[[Category: Ph domain]]
+
-
[[Category: Signaling protein]]
+

Current revision

GRP1 PH DOMAIN (UNLIGANDED)

PDB ID 1fgz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools