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1gvp
From Proteopedia
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| - | [[Image:1gvp.png|left|200px]] | ||
| - | + | ==GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)== | |
| - | + | <StructureSection load='1gvp' size='340' side='right'caption='[[1gvp]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1gvp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GVP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1gvp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gvp OCA], [https://pdbe.org/1gvp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1gvp RCSB], [https://www.ebi.ac.uk/pdbsum/1gvp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1gvp ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1gvp]] is a 1 chain structure with sequence from [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/G5P_BPF1 G5P_BPF1] Binds to DNA in a highly cooperative manner without pronounced sequence specificity. During synthesis of the single-stranded (progeny) viral DNA, prevents the conversion into the double-stranded replicative form. G5P is displaced by the capsid protein G8P during phage assembly on the inner bacterial membrane (By similarity). | |
| - | == | + | == Evolutionary Conservation == |
| - | < | + | [[Image:Consurf_key_small.gif|200px|right]] |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gv/1gvp_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1gvp ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
| - | [[Category: Gao | + | [[Category: Large Structures]] |
| - | [[Category: Su | + | [[Category: Gao Y-G]] |
| - | [[Category: Terwilliger | + | [[Category: Su S]] |
| - | [[Category: Wang | + | [[Category: Terwilliger TC]] |
| - | [[Category: Zhang | + | [[Category: Wang AH-J]] |
| - | + | [[Category: Zhang H]] | |
| - | + | ||
Current revision
GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN)
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