1h9f

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:31, 15 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1h9f.png|left|200px]]
 
-
{{STRUCTURE_1h9f| PDB=1h9f | SCENE= }}
+
==LEM DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2==
 +
<StructureSection load='1h9f' size='340' side='right'caption='[[1h9f]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1h9f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H9F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1H9F FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1h9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h9f OCA], [https://pdbe.org/1h9f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1h9f RCSB], [https://www.ebi.ac.uk/pdbsum/1h9f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1h9f ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/LAP2A_HUMAN LAP2A_HUMAN] Defects in TMPO are the cause of cardiomyopathy dilated type 1T (CMD1T) [MIM:[https://omim.org/entry/613740 613740]. A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death.<ref>PMID:16247757</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LAP2A_HUMAN LAP2A_HUMAN] May be involved in the structural organization of the nucleus and in the post-mitotic nuclear assembly. Plays an important role, together with LMNA, in the nuclear anchorage of RB1. TP and TP5 may play a role in T-cell development and function. TP5 is an immunomodulating pentapeptide.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h9/1h9f_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1h9f ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
BACKGROUND: Integral membrane proteins of the inner nuclear membrane are involved in chromatin organization and postmitotic reassembly of the nucleus. The discovery that mutations in the gene encoding emerin causes X-linked Emery-Dreifuss muscular dystrophy has enhanced interest in such proteins. A common structural domain of 50 residues, called the LEM domain, has been identified in emerin MAN1, and lamina-associated polypeptide (LAP) 2. In particular, all LAP2 isoforms share an N-terminal segment composed of such a LEM domain that is connected to a highly divergent LEM-like domain by a linker that is probably unstructured. RESULTS: We have determined the three-dimensional structures of the LEM and LEM-like domains of LAP2 using nuclear magnetic resonance and molecular modeling. Both domains adopt the same fold, mainly composed of two large parallel alpha helices. CONCLUSIONS: The structural LEM motif is found in human inner nuclear membrane proteins and in protein-protein interaction domains from bacterial multienzyme complexes. This suggests that LEM and LEM-like domains are protein-protein interaction domains. A region conserved in all LEM domains, at the surface of helix 2, could mediate interaction between LEM domains and a common protein partner.
-
===LEM DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2===
+
Structural characterization of the LEM motif common to three human inner nuclear membrane proteins.,Laguri C, Gilquin B, Wolff N, Romi-Lebrun R, Courchay K, Callebaut I, Worman HJ, Zinn-Justin S Structure. 2001 Jun;9(6):503-11. PMID:11435115<ref>PMID:11435115</ref>
-
{{ABSTRACT_PUBMED_11435115}}
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
==About this Structure==
+
<div class="pdbe-citations 1h9f" style="background-color:#fffaf0;"></div>
-
[[1h9f]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1H9F OCA].
+
== References ==
-
 
+
<references/>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:011435115</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Callebaut, I.]]
+
[[Category: Homo sapiens]]
-
[[Category: Courchay, K.]]
+
[[Category: Large Structures]]
-
[[Category: Gilquin, B.]]
+
[[Category: Callebaut I]]
-
[[Category: Laguri, C.]]
+
[[Category: Courchay K]]
-
[[Category: Romi-Lebrun, R.]]
+
[[Category: Gilquin B]]
-
[[Category: Wolff, N.]]
+
[[Category: Laguri C]]
-
[[Category: Worman, H J.]]
+
[[Category: Romi-Lebrun R]]
-
[[Category: Zinn-Justin, S.]]
+
[[Category: Wolff N]]
-
[[Category: Emerin]]
+
[[Category: Worman HJ]]
-
[[Category: Inner nuclear membrane protein]]
+
[[Category: Zinn-Justin S]]
-
[[Category: Lamina-associated polypeptide]]
+
-
[[Category: Lem domain]]
+
-
[[Category: Membrane protein]]
+

Current revision

LEM DOMAIN OF HUMAN INNER NUCLEAR MEMBRANE PROTEIN LAP2

PDB ID 1h9f

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools