1hmw
From Proteopedia
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- | [[Image:1hmw.png|left|200px]] | ||
- | + | ==ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS== | |
- | + | <StructureSection load='1hmw' size='340' side='right'caption='[[1hmw]], [[Resolution|resolution]] 2.30Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1hmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pedobacter_heparinus Pedobacter heparinus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HMW FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASG:2-DEOXY-2-ACETAMIDO-BETA-D-GALACTOSE-4-SULFATE'>ASG</scene>, <scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GCD:4,5-DEHYDRO-D-GLUCURONIC+ACID'>GCD</scene>, <scene name='pdbligand=GCU:D-GLUCURONIC+ACID'>GCU</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MXY:2-O-METHYL+FUCOSE'>MXY</scene>, <scene name='pdbligand=NG6:N-ACETYL-D-GALACTOSAMINE+6-SULFATE'>NG6</scene>, <scene name='pdbligand=RAM:ALPHA-L-RHAMNOSE'>RAM</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr> | |
- | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hmw OCA], [https://pdbe.org/1hmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hmw RCSB], [https://www.ebi.ac.uk/pdbsum/1hmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hmw ProSAT]</span></td></tr> |
- | [[1hmw]] is a 1 chain structure with sequence from [ | + | </table> |
- | + | == Function == | |
- | == | + | [https://www.uniprot.org/uniprot/CSLA_PEDHD CSLA_PEDHD] |
- | < | + | == Evolutionary Conservation == |
- | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/1hmw_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hmw ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Pedobacter heparinus]] | [[Category: Pedobacter heparinus]] | ||
- | [[Category: Boju | + | [[Category: Boju L]] |
- | [[Category: Cygler | + | [[Category: Cygler M]] |
- | [[Category: Gunay | + | [[Category: Gunay NS]] |
- | [[Category: Huang | + | [[Category: Huang W]] |
- | [[Category: Kim | + | [[Category: Kim YS]] |
- | [[Category: Linhardt | + | [[Category: Linhardt RJ]] |
- | [[Category: Matte | + | [[Category: Matte A]] |
- | [[Category: Su | + | [[Category: Su H]] |
- | [[Category: Tkalec | + | [[Category: Tkalec L]] |
- | [[Category: Yang | + | [[Category: Yang HO]] |
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- | + | ||
- | + | ||
- | + |
Current revision
ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS
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Categories: Large Structures | Pedobacter heparinus | Boju L | Cygler M | Gunay NS | Huang W | Kim YS | Linhardt RJ | Matte A | Su H | Tkalec L | Yang HO