1j24

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1j24" [edit=sysop:move=sysop])
Current revision (06:02, 3 April 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1j24.png|left|200px]]
 
-
{{STRUCTURE_1j24| PDB=1j24 | SCENE= }}
+
==Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal==
-
 
+
<StructureSection load='1j24' size='340' side='right'caption='[[1j24]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-
===Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1j24]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J24 FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_12679022}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j24 OCA], [https://pdbe.org/1j24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j24 RCSB], [https://www.ebi.ac.uk/pdbsum/1j24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j24 ProSAT]</span></td></tr>
-
[[1j24]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J24 OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/Q8TZH8_PYRFU Q8TZH8_PYRFU]
-
<ref group="xtra">PMID:012679022</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Pyrococcus furiosus]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ishino, Y.]]
+
Check<jmol>
-
[[Category: Komori, K.]]
+
<jmolCheckbox>
-
[[Category: Morikawa, K.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j2/1j24_consurf.spt"</scriptWhenChecked>
-
[[Category: Nishino, T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Hydrolase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Structure-specific endonuclease]]
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j24 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus furiosus DSM 3638]]
 +
[[Category: Ishino Y]]
 +
[[Category: Komori K]]
 +
[[Category: Morikawa K]]
 +
[[Category: Nishino T]]

Current revision

Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal

PDB ID 1j24

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools