4au1
From Proteopedia
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- | [[Image:4au1.png|left|200px]] | ||
- | + | ==Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA== | |
+ | <StructureSection load='4au1' size='340' side='right'caption='[[4au1]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4au1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_capsulatus_SB_1003 Rhodobacter capsulatus SB 1003]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AU1 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=P8X:DESMETHYL-HBA'>P8X</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4au1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4au1 OCA], [https://pdbe.org/4au1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4au1 RCSB], [https://www.ebi.ac.uk/pdbsum/4au1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4au1 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/D5AV08_RHOCB D5AV08_RHOCB] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The biosynthesis of many vitamins and coenzymes has often proven difficult to elucidate owing to a combination of low abundance and kinetic lability of the pathway intermediates. Through a serial reconstruction of the cobalamin (vitamin B(12)) pathway in Escherichia coli and by His tagging the terminal enzyme in the reaction sequence, we have observed that many unstable intermediates can be isolated as tightly bound enzyme-product complexes. Together, these approaches have been used to extract intermediates between precorrin-4 and hydrogenobyrinic acid in their free acid form and permitted the delineation of the overall reaction catalyzed by CobL, including the formal elucidation of precorrin-7 as a metabolite. Furthermore, a substrate-carrier protein, CobE, that can also be used to stabilize some of the transient metabolic intermediates and enhance their onward transformation, has been identified. The tight association of pathway intermediates with enzymes provides evidence for a form of metabolite channeling. | ||
- | + | An enzyme-trap approach allows isolation of intermediates in cobalamin biosynthesis.,Deery E, Schroeder S, Lawrence AD, Taylor SL, Seyedarabi A, Waterman J, Wilson KS, Brown D, Geeves MA, Howard MJ, Pickersgill RW, Warren MJ Nat Chem Biol. 2012 Oct 7. doi: 10.1038/nchembio.1086. PMID:23042036<ref>PMID:23042036</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | == | + | <div class="pdbe-citations 4au1" style="background-color:#fffaf0;"></div> |
- | + | == References == | |
- | [[Category: | + | <references/> |
- | [[Category: Rhodobacter capsulatus | + | __TOC__ |
- | [[Category: Brown | + | </StructureSection> |
- | [[Category: Deery | + | [[Category: Large Structures]] |
- | [[Category: Geeves | + | [[Category: Rhodobacter capsulatus SB 1003]] |
- | [[Category: Howard | + | [[Category: Brown D]] |
- | [[Category: Lawrence | + | [[Category: Deery E]] |
- | [[Category: Pickersgill | + | [[Category: Geeves MA]] |
- | [[Category: Schroeder | + | [[Category: Howard MJ]] |
- | [[Category: Seyedarabi | + | [[Category: Lawrence AD]] |
- | [[Category: Taylor | + | [[Category: Pickersgill RW]] |
- | [[Category: Vevodova | + | [[Category: Schroeder S]] |
- | [[Category: Warren | + | [[Category: Seyedarabi A]] |
- | [[Category: Wilson | + | [[Category: Taylor SL]] |
- | + | [[Category: Vevodova J]] | |
- | + | [[Category: Warren MJ]] | |
- | + | [[Category: Wilson KS]] |
Current revision
Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA
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