4amc
From Proteopedia
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- | [[Image:4amc.png|left|200px]] | ||
- | + | ==Crystal structure of Lactobacillus reuteri 121 N-terminally truncated glucansucrase GTFA== | |
+ | <StructureSection load='4amc' size='340' side='right'caption='[[4amc]], [[Resolution|resolution]] 3.60Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4amc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Limosilactobacillus_reuteri Limosilactobacillus reuteri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AMC FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.6Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4amc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4amc OCA], [https://pdbe.org/4amc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4amc RCSB], [https://www.ebi.ac.uk/pdbsum/4amc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4amc ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q5SBL9_LIMRT Q5SBL9_LIMRT] Production of extracellular glucans, that are thought to play a key role in the development of the dental plaque because of their ability to adhere to smooth surfaces and mediate the aggregation of bacterial cells and food debris.[ARBA:ARBA00003243] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The reuteransucrase GTFA from Lactobacillus reuteri 121, which belongs to glycosyl hydrolase family GH70, synthesizes branched alpha-glucans with both alpha-1,6- and alpha-1,4-glycosidic linkages (reuteran) from sucrose. The crystal structure of GTFA-DeltaN, a 118 kDa fragment of GTFA comprising residues 745-1763 and including the catalytic domain, was determined at 3.6 A resolution by molecular replacement. The crystals have large solvent channels and an unusually high solvent content of 85%. GTFA-DeltaN has the same domain arrangement and domain topologies as observed in previously determined GH70 glucansucrase structures. The architecture of the GTFA-DeltaN active site and binding pocket confirms that glucansucrases have a conserved substrate specificity for sucrose. However, this first crystal structure of an alpha-1,6/alpha-1,4-specific glucansucrase shows that residues from conserved sequence motif IV (1128-1136 in GTFA-DeltaN) contribute to the acceptor-binding subsites and that they display differences compared with other structurally characterized glucansucrases. In particular, the structure clarifies the importance of residues following the transition-state stabilizer for product specificity, and especially residue Asn1134, which is in a position to interact with sugar units in acceptor subsite +2. | ||
- | + | Structure of the alpha-1,6/alpha-1,4-specific glucansucrase GTFA from Lactobacillus reuteri 121.,Pijning T, Vujicic-Zagar A, Kralj S, Dijkhuizen L, Dijkstra BW Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Dec 1;68(Pt 12):1448-54., doi: 10.1107/S1744309112044168. Epub 2012 Nov 14. PMID:23192022<ref>PMID:23192022</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | <div class="pdbe-citations 4amc" style="background-color:#fffaf0;"></div> | |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: Dijkhuizen | + | __TOC__ |
- | [[Category: Dijkstra | + | </StructureSection> |
- | [[Category: Kralj | + | [[Category: Large Structures]] |
- | [[Category: Pijning | + | [[Category: Limosilactobacillus reuteri]] |
- | [[Category: Vujicic-Zagar | + | [[Category: Dijkhuizen L]] |
- | + | [[Category: Dijkstra BW]] | |
- | + | [[Category: Kralj S]] | |
- | + | [[Category: Pijning T]] | |
+ | [[Category: Vujicic-Zagar A]] |
Current revision
Crystal structure of Lactobacillus reuteri 121 N-terminally truncated glucansucrase GTFA
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