This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jep

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1jep" [edit=sysop:move=sysop])
Current revision (07:38, 7 February 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jep.png|left|200px]]
 
-
{{STRUCTURE_1jep| PDB=1jep | SCENE= }}
+
==Chalcone Isomerase Complexed with 4'-hydroxyflavanone==
-
 
+
<StructureSection load='1jep' size='340' side='right'caption='[[1jep]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===Chalcone Isomerase Complexed with 4'-hydroxyflavanone===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jep]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Medicago_sativa Medicago sativa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JEP FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11698411}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DFL:2-(4-HYDROXY-PHENYL)-CHROMAN-4-ONE'>DFL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jep OCA], [https://pdbe.org/1jep PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jep RCSB], [https://www.ebi.ac.uk/pdbsum/1jep PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jep ProSAT]</span></td></tr>
-
[[1jep]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Medicago_sativa Medicago sativa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEP OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/CFI1_MEDSA CFI1_MEDSA] Catalyzes the intramolecular cyclization of bicyclic chalcones into tricyclic (S)-flavanones. Responsible for the isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed chalcone) into naringenin.<ref>PMID:10966651</ref> <ref>PMID:11955065</ref> <ref>PMID:11698411</ref>
-
<ref group="xtra">PMID:011698411</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Chalcone isomerase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/1jep_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jep ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Medicago sativa]]
[[Category: Medicago sativa]]
-
[[Category: Jez, J M.]]
+
[[Category: Jez JM]]
-
[[Category: Noel, J P.]]
+
[[Category: Noel JP]]
-
[[Category: Isomerase]]
+
-
[[Category: Open-faced beta sandwich]]
+

Current revision

Chalcone Isomerase Complexed with 4'-hydroxyflavanone

PDB ID 1jep

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools