This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jys

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1jys" [edit=sysop:move=sysop])
Current revision (07:42, 7 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jys.png|left|200px]]
 
-
{{STRUCTURE_1jys| PDB=1jys | SCENE= }}
+
==Crystal Structure of E. coli MTA/AdoHcy Nucleosidase==
-
 
+
<StructureSection load='1jys' size='340' side='right'caption='[[1jys]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
===Crystal Structure of E. coli MTA/AdoHcy Nucleosidase===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jys]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JYS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JYS FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11591349}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jys FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jys OCA], [https://pdbe.org/1jys PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jys RCSB], [https://www.ebi.ac.uk/pdbsum/1jys PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jys ProSAT]</span></td></tr>
-
[[1jys]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JYS OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/MTNN_ECOLI MTNN_ECOLI] Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively. Can also use 5'-isobutylthioadenosine, 5'-n-butylthioadenosine, S-adenosyl-D-homocysteine, decarboxylated adenosylhomocysteine, deaminated adenosylhomocysteine and S-2-aza-adenosylhomocysteine as substrates.[HAMAP-Rule:MF_01684]
-
<ref group="xtra">PMID:011591349</ref><ref group="xtra">PMID:016109423</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Adenosylhomocysteine nucleosidase]]
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jy/1jys_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jys ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Cornell, K A.]]
+
[[Category: Large Structures]]
-
[[Category: Howell, P L.]]
+
[[Category: Cornell KA]]
-
[[Category: Lee, J E.]]
+
[[Category: Howell PL]]
-
[[Category: Riscoe, M K.]]
+
[[Category: Lee JE]]
-
[[Category: Dimer]]
+
[[Category: Riscoe MK]]
-
[[Category: Hydrolase]]
+
-
[[Category: Mixed alpha/beta]]
+

Current revision

Crystal Structure of E. coli MTA/AdoHcy Nucleosidase

PDB ID 1jys

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools