This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1jrf
From Proteopedia
(Difference between revisions)
| (8 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1jrf.png|left|200px]] | ||
| - | + | ==NMR Solution Structure of the Viral Receptor Domain of Tva== | |
| - | + | <StructureSection load='1jrf' size='340' side='right'caption='[[1jrf]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1jrf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Coturnix_japonica Coturnix japonica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JRF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JRF FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jrf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jrf OCA], [https://pdbe.org/1jrf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jrf RCSB], [https://www.ebi.ac.uk/pdbsum/1jrf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jrf ProSAT]</span></td></tr> |
| - | [[1jrf]] is a 1 chain structure with sequence from [ | + | </table> |
| - | + | == Function == | |
| - | == | + | [https://www.uniprot.org/uniprot/RSVR_COTJA RSVR_COTJA] Responsible for susceptibility to the retrovirus subgroup A Rous sarcoma virus. |
| - | < | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jr/1jrf_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jrf ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Coturnix japonica]] | [[Category: Coturnix japonica]] | ||
| - | [[Category: Dolmer | + | [[Category: Large Structures]] |
| - | [[Category: Gettins | + | [[Category: Dolmer K]] |
| - | [[Category: Huang | + | [[Category: Gettins PGW]] |
| - | [[Category: Rong | + | [[Category: Huang W]] |
| - | [[Category: Wang | + | [[Category: Rong L]] |
| - | + | [[Category: Wang Q-Y]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
NMR Solution Structure of the Viral Receptor Domain of Tva
| |||||||||||
