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1jbi
From Proteopedia
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| - | [[Image:1jbi.png|left|200px]] | ||
| - | + | ==NMR structure of the LCCL domain== | |
| - | + | <StructureSection load='1jbi' size='340' side='right'caption='[[1jbi]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1jbi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JBI FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jbi OCA], [https://pdbe.org/1jbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jbi RCSB], [https://www.ebi.ac.uk/pdbsum/1jbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jbi ProSAT]</span></td></tr> | |
| - | == | + | </table> |
| - | [[1jbi]] is a 1 chain structure with sequence from [ | + | == Disease == |
| - | + | [https://www.uniprot.org/uniprot/COCH_HUMAN COCH_HUMAN] Defects in COCH are the cause of deafness autosomal dominant type 9 (DFNA9) [MIM:[https://omim.org/entry/601369 601369]. DFNA9 is a form of sensorineural hearing loss. Sensorineural deafness results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. DFNA9 is characterized by onset in the fourth or fifth decade of life and initially involves the high frequencies. Deafness is progressive and usually complete by the sixth decade. In addition to cochlear involvement, DFNA9 patients also exhibit a spectrum of vestibular dysfunctions. Penetrance of the vestibular symptoms is often incomplete, and some patients are minimally affected, whereas others suffer from severe balance disturbances and episodes of vertigo. Affected individuals have mucopolysaccharide depositions in the channels of the cochlear and vestibular nerves. These depositions apparently cause strangulation and degeneration of dendritic fibers.<ref>PMID:9806553</ref> <ref>PMID:9931344</ref> <ref>PMID:10400989</ref> <ref>PMID:11295836</ref> <ref>PMID:14512963</ref> <ref>PMID:12928864</ref> | |
| - | == | + | == Function == |
| - | < | + | [https://www.uniprot.org/uniprot/COCH_HUMAN COCH_HUMAN] Plays a role in the control of cell shape and motility in the trabecular meshwork.<ref>PMID:21886777</ref> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jb/1jbi_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jbi ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: Banyai | + | [[Category: Large Structures]] |
| - | [[Category: Kaikkonen | + | [[Category: Banyai L]] |
| - | [[Category: Liepinsh | + | [[Category: Kaikkonen A]] |
| - | [[Category: Otting | + | [[Category: Liepinsh E]] |
| - | [[Category: Patthy | + | [[Category: Otting G]] |
| - | [[Category: Trexler | + | [[Category: Patthy L]] |
| - | [[Category: Weigelt | + | [[Category: Trexler M]] |
| - | + | [[Category: Weigelt J]] | |
| - | + | ||
| - | + | ||
Current revision
NMR structure of the LCCL domain
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Categories: Homo sapiens | Large Structures | Banyai L | Kaikkonen A | Liepinsh E | Otting G | Patthy L | Trexler M | Weigelt J

