This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jfm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1jfm" [edit=sysop:move=sysop])
Current revision (07:51, 3 April 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jfm.png|left|200px]]
 
-
{{STRUCTURE_1jfm| PDB=1jfm | SCENE= }}
+
==CRYSTAL STRUCTURE OF MURINE NK CELL LIGAND RAE-1 BETA==
-
 
+
<StructureSection load='1jfm' size='340' side='right'caption='[[1jfm]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF MURINE NK CELL LIGAND RAE-1 BETA===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1jfm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JFM FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11825567}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jfm OCA], [https://pdbe.org/1jfm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jfm RCSB], [https://www.ebi.ac.uk/pdbsum/1jfm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jfm ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[1jfm]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JFM OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/RAE1B_MOUSE RAE1B_MOUSE] Acts as a ligand for NKG2D.<ref>PMID:10894171</ref>
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:011825567</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jf/1jfm_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jfm ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Li, P.]]
+
[[Category: Li P]]
-
[[Category: Strong, R K.]]
+
[[Category: Strong RK]]
-
[[Category: Immune system]]
+
-
[[Category: Mhc-i platform]]
+
-
[[Category: Murine nk cell ligand]]
+
-
[[Category: Nkg2d]]
+
-
[[Category: Rae-1 beta]]
+

Current revision

CRYSTAL STRUCTURE OF MURINE NK CELL LIGAND RAE-1 BETA

PDB ID 1jfm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools