1k6i
From Proteopedia
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- | [[Image:1k6i.png|left|200px]] | ||
- | + | ==Crystal structure of Nmra, a negative transcriptional regulator (Trigonal form)== | |
- | + | <StructureSection load='1k6i' size='340' side='right'caption='[[1k6i]], [[Resolution|resolution]] 1.80Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[1k6i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_nidulans Aspergillus nidulans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K6I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K6I FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |
- | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k6i OCA], [https://pdbe.org/1k6i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k6i RCSB], [https://www.ebi.ac.uk/pdbsum/1k6i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k6i ProSAT]</span></td></tr> |
- | [[1k6i]] is a 1 chain structure with sequence from [ | + | </table> |
- | + | == Function == | |
- | == | + | [https://www.uniprot.org/uniprot/NMRA_EMENI NMRA_EMENI] May be a redox sensor protein. Has much higher affinity for NAD(P) than for NAD(P)H. Has similar affinity for NAD and NADP. Negative transcriptional regulator involved in the post-transcriptional modulation of the GATA-type transcription factor areA, forming part of a system controlling nitrogen metabolite repression (By similarity). Interferes with the interaction between areA and target DNA. Overexpression leads to areA inhibition.<ref>PMID:17854403</ref> <ref>PMID:12764138</ref> <ref>PMID:15537757</ref> <ref>PMID:18602114</ref> |
- | < | + | == Evolutionary Conservation == |
- | [[Category: | + | [[Image:Consurf_key_small.gif|200px|right]] |
- | [[Category: Cocklin | + | Check<jmol> |
- | [[Category: Dodds | + | <jmolCheckbox> |
- | [[Category: Hawkins | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k6/1k6i_consurf.spt"</scriptWhenChecked> |
- | [[Category: Lamb | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
- | [[Category: Leslie | + | <text>to colour the structure by Evolutionary Conservation</text> |
- | [[Category: Nichols | + | </jmolCheckbox> |
- | [[Category: Ren | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k6i ConSurf]. |
- | [[Category: Stammers | + | <div style="clear:both"></div> |
- | + | == References == | |
- | + | <references/> | |
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Aspergillus nidulans]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Cocklin S]] | ||
+ | [[Category: Dodds A]] | ||
+ | [[Category: Hawkins AR]] | ||
+ | [[Category: Lamb HK]] | ||
+ | [[Category: Leslie K]] | ||
+ | [[Category: Nichols CE]] | ||
+ | [[Category: Ren J]] | ||
+ | [[Category: Stammers DK]] |
Current revision
Crystal structure of Nmra, a negative transcriptional regulator (Trigonal form)
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Categories: Aspergillus nidulans | Large Structures | Cocklin S | Dodds A | Hawkins AR | Lamb HK | Leslie K | Nichols CE | Ren J | Stammers DK