1no5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1no5" [edit=sysop:move=sysop])
Current revision (07:58, 14 February 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1no5.png|left|200px]]
 
-
{{STRUCTURE_1no5| PDB=1no5 | SCENE= }}
+
==Structure of HI0073 from Haemophilus influenzae, the nucleotide binding domain of the HI0073/HI0074 two protein nucleotidyl transferase.==
-
 
+
<StructureSection load='1no5' size='340' side='right'caption='[[1no5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===Structure of HI0073 from Haemophilus influenzae, the nucleotide binding domain of the HI0073/HI0074 two protein nucleotidyl transferase.===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1no5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NO5 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[1no5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NO5 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1no5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1no5 OCA], [https://pdbe.org/1no5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1no5 RCSB], [https://www.ebi.ac.uk/pdbsum/1no5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1no5 ProSAT]</span></td></tr>
-
 
+
</table>
-
==Reference==
+
== Function ==
-
<ref group="xtra">PMID:016028221</ref><references group="xtra"/>
+
[https://www.uniprot.org/uniprot/MNTA_HAEIN MNTA_HAEIN] Probable antitoxin component of a type VII toxin-antitoxin (TA) system. Neutralizes cognate toxic HEPN probably by di-AMPylation (Probable). A mixture of HepT and MntA binds nucleotides; the highest affinity is for TTP, ATP binds more tightly than ADP or AMP (PubMed:16028221).<ref>PMID:16028221</ref> <ref>PMID:29555683</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/1no5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1no5 ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Haemophilus influenzae]]
[[Category: Haemophilus influenzae]]
-
[[Category: Galkin, A.]]
+
[[Category: Large Structures]]
-
[[Category: Herzberg, O.]]
+
[[Category: Galkin A]]
-
[[Category: Howard, A.]]
+
[[Category: Herzberg O]]
-
[[Category: Krajewski, W.]]
+
[[Category: Howard A]]
-
[[Category: Lehmann, C.]]
+
[[Category: Krajewski W]]
-
[[Category: Pullalarevu, S.]]
+
[[Category: Lehmann C]]
-
[[Category: S2F, Structure 2.Function Project.]]
+
[[Category: Pullalarevu S]]
-
[[Category: Willis, M A.]]
+
[[Category: Willis MA]]
-
[[Category: Hi0073]]
+
-
[[Category: Hi0074]]
+
-
[[Category: Nucleotidyl transferase]]
+
-
[[Category: S2f]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure 2 function project]]
+
-
[[Category: Unknown function]]
+

Current revision

Structure of HI0073 from Haemophilus influenzae, the nucleotide binding domain of the HI0073/HI0074 two protein nucleotidyl transferase.

PDB ID 1no5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools